RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 SPRR2FQ96RM1 72 aa7.41□□□□□ -1.22
SLC9A3R1-201ENST00000262613 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
SLC9A3R1-201ENST00000262613 MT1LQ93083 61 aa7.37□□□□□ -1.23
SLC9A3R1-201ENST00000262613 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
SLC9A3R1-201ENST00000262613 KRTAP19-4Q3LI73 84 aa7.34□□□□□ -1.23
SLC9A3R1-201ENST00000262613 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
SLC9A3R1-201ENST00000262613 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
SLC9A3R1-201ENST00000262613 KRTAP6-3Q3LI67 103 aa7.25□□□□□ -1.25
SLC9A3R1-201ENST00000262613 KRTAP19-3Q7Z4W3 81 aa7.24□□□□□ -1.25
SLC9A3R1-201ENST00000262613 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
SLC9A3R1-201ENST00000262613 MT1GP13640 62 aa7.15□□□□□ -1.26
SLC9A3R1-201ENST00000262613 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
SLC9A3R1-201ENST00000262613 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.26
SLC9A3R1-201ENST00000262613 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
SLC9A3R1-201ENST00000262613 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
SLC9A3R1-201ENST00000262613 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
SLC9A3R1-201ENST00000262613 LCE1AQ5T7P2 110 aa7.11□□□□□ -1.27
SLC9A3R1-201ENST00000262613 MT1MQ8N339 61 aa7.09□□□□□ -1.27
SLC9A3R1-201ENST00000262613 SPRR2EP22531 72 aa7.05□□□□□ -1.28
SLC9A3R1-201ENST00000262613 SPRR2BP35325 72 aa7.05□□□□□ -1.28
SLC9A3R1-201ENST00000262613 SPRR2AP35326 72 aa7.05□□□□□ -1.28
SLC9A3R1-201ENST00000262613 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
SLC9A3R1-201ENST00000262613 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
SLC9A3R1-201ENST00000262613 SPRR2DP22532 72 aa6.78□□□□□ -1.32
SLC9A3R1-201ENST00000262613 NEBP20929 6669 aa6.75□□□□□ -1.33
SLC9A3R1-201ENST00000262613 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
SLC9A3R1-201ENST00000262613 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
SLC9A3R1-201ENST00000262613 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
SLC9A3R1-201ENST00000262613 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
SLC9A3R1-201ENST00000262613 KRTAP12-4P60329 112 aa6.26□□□□□ -1.41
SLC9A3R1-201ENST00000262613 MT1AP04731 61 aa6.26□□□□□ -1.41
SLC9A3R1-201ENST00000262613 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
SLC9A3R1-201ENST00000262613 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
SLC9A3R1-201ENST00000262613 KRTAP2-2Q9BYT5 123 aa6.2□□□□□ -1.42
SLC9A3R1-201ENST00000262613 KRTAP5-4Q6L8H1 288 aa6.15□□□□□ -1.42
SLC9A3R1-201ENST00000262613 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
SLC9A3R1-201ENST00000262613 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
SLC9A3R1-201ENST00000262613 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
SLC9A3R1-201ENST00000262613 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
SLC9A3R1-201ENST00000262613 MT4P47944 62 aa5.89□□□□□ -1.47
SLC9A3R1-201ENST00000262613 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
SLC9A3R1-201ENST00000262613 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
SLC9A3R1-201ENST00000262613 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
SLC9A3R1-201ENST00000262613 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
SLC9A3R1-201ENST00000262613 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
SLC9A3R1-201ENST00000262613 HMCN1Q96RW7 5635 aa5.74□□□□□ -1.49
SLC9A3R1-201ENST00000262613 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
SLC9A3R1-201ENST00000262613 MT3P25713 68 aa5.66□□□□□ -1.5
SLC9A3R1-201ENST00000262613 PRM1P04553 51 aa5.58□□□□□ -1.52
SLC9A3R1-201ENST00000262613 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
SLC9A3R1-201ENST00000262613 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
SLC9A3R1-201ENST00000262613 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
SLC9A3R1-201ENST00000262613 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
SLC9A3R1-201ENST00000262613 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
SLC9A3R1-201ENST00000262613 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
SLC9A3R1-201ENST00000262613 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
SLC9A3R1-201ENST00000262613 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
SLC9A3R1-201ENST00000262613 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
SLC9A3R1-201ENST00000262613 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
SLC9A3R1-201ENST00000262613 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.66
SLC9A3R1-201ENST00000262613 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
SLC9A3R1-201ENST00000262613 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SLC9A3R1-201ENST00000262613 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
SLC9A3R1-201ENST00000262613 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
SLC9A3R1-201ENST00000262613 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
SLC9A3R1-201ENST00000262613 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
SLC9A3R1-201ENST00000262613 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
SLC9A3R1-201ENST00000262613 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
SLC9A3R1-201ENST00000262613 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
SLC9A3R1-201ENST00000262613 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
SLC9A3R1-201ENST00000262613 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
SLC9A3R1-201ENST00000262613 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SLC9A3R1-201ENST00000262613 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
SLC9A3R1-201ENST00000262613 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
SLC9A3R1-201ENST00000262613 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
SLC9A3R1-201ENST00000262613 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SLC9A3R1-201ENST00000262613 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms