RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
NDC80-201ENST00000261597 MT1XP80297 61 aa2.78□□□□□ -1.96
NDC80-201ENST00000261597 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
NDC80-201ENST00000261597 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.97
NDC80-201ENST00000261597 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
NDC80-201ENST00000261597 TNP1P09430 55 aa2.74□□□□□ -1.97
NDC80-201ENST00000261597 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
NDC80-201ENST00000261597 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
NDC80-201ENST00000261597 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
NDC80-201ENST00000261597 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.97
NDC80-201ENST00000261597 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
NDC80-201ENST00000261597 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
NDC80-201ENST00000261597 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
NDC80-201ENST00000261597 NEBP20929 6669 aa2.64□□□□□ -1.99
NDC80-201ENST00000261597 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
NDC80-201ENST00000261597 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
NDC80-201ENST00000261597 MUC12Q9UKN1 5478 aa2.59□□□□□ -2
NDC80-201ENST00000261597 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
NDC80-201ENST00000261597 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
NDC80-201ENST00000261597 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
NDC80-201ENST00000261597 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
NDC80-201ENST00000261597 MDN1Q9NU22 5596 aa2.54□□□□□ -2
NDC80-201ENST00000261597 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
NDC80-201ENST00000261597 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
NDC80-201ENST00000261597 KMT2DO14686 5537 aa2.52□□□□□ -2.01
NDC80-201ENST00000261597 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
NDC80-201ENST00000261597 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
NDC80-201ENST00000261597 MT1EP04732 61 aa2.44□□□□□ -2.02
NDC80-201ENST00000261597 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
NDC80-201ENST00000261597 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
NDC80-201ENST00000261597 KRTAP5-9P26371 169 aa2.4□□□□□ -2.02
NDC80-201ENST00000261597 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.02
NDC80-201ENST00000261597 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
NDC80-201ENST00000261597 MT1LQ93083 61 aa2.39□□□□□ -2.03
NDC80-201ENST00000261597 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
NDC80-201ENST00000261597 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
NDC80-201ENST00000261597 MT1GP13640 62 aa2.35□□□□□ -2.03
NDC80-201ENST00000261597 MT1MQ8N339 61 aa2.3□□□□□ -2.04
NDC80-201ENST00000261597 SPRR2EP22531 72 aa2.29□□□□□ -2.04
NDC80-201ENST00000261597 SPRR2BP35325 72 aa2.29□□□□□ -2.04
NDC80-201ENST00000261597 SPRR2AP35326 72 aa2.29□□□□□ -2.04
NDC80-201ENST00000261597 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
NDC80-201ENST00000261597 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
NDC80-201ENST00000261597 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
NDC80-201ENST00000261597 SPRR2DP22532 72 aa2.21□□□□□ -2.06
NDC80-201ENST00000261597 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
NDC80-201ENST00000261597 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
NDC80-201ENST00000261597 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
NDC80-201ENST00000261597 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
NDC80-201ENST00000261597 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
NDC80-201ENST00000261597 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
NDC80-201ENST00000261597 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
NDC80-201ENST00000261597 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
NDC80-201ENST00000261597 MT1AP04731 61 aa2.04□□□□□ -2.08
NDC80-201ENST00000261597 INE1O15225 51 aa2.01□□□□□ -2.09
NDC80-201ENST00000261597 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
NDC80-201ENST00000261597 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
NDC80-201ENST00000261597 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
NDC80-201ENST00000261597 MT4P47944 62 aa1.97□□□□□ -2.09
NDC80-201ENST00000261597 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
NDC80-201ENST00000261597 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
NDC80-201ENST00000261597 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
NDC80-201ENST00000261597 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
NDC80-201ENST00000261597 KRTAP20-2Q3LI61 65 aa1.86□□□□□ -2.11
NDC80-201ENST00000261597 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
NDC80-201ENST00000261597 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
NDC80-201ENST00000261597 MUC5ACP98088 5654 aa1.84□□□□□ -2.12
NDC80-201ENST00000261597 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
NDC80-201ENST00000261597 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
NDC80-201ENST00000261597 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
NDC80-201ENST00000261597 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
NDC80-201ENST00000261597 PRM1P04553 51 aa1.47□□□□□ -2.17
NDC80-201ENST00000261597 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
NDC80-201ENST00000261597 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
NDC80-201ENST00000261597 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
NDC80-201ENST00000261597 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
NDC80-201ENST00000261597 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 125.5 ms