RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 MT1EP04732 61 aa6.77□□□□□ -1.33
COL4A3BP-201ENST00000261415 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
COL4A3BP-201ENST00000261415 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
COL4A3BP-201ENST00000261415 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
COL4A3BP-201ENST00000261415 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
COL4A3BP-201ENST00000261415 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
COL4A3BP-201ENST00000261415 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
COL4A3BP-201ENST00000261415 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
COL4A3BP-201ENST00000261415 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
COL4A3BP-201ENST00000261415 MT1LQ93083 61 aa6.61□□□□□ -1.35
COL4A3BP-201ENST00000261415 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
COL4A3BP-201ENST00000261415 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
COL4A3BP-201ENST00000261415 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
COL4A3BP-201ENST00000261415 SPRR2EP22531 72 aa6.47□□□□□ -1.37
COL4A3BP-201ENST00000261415 SPRR2BP35325 72 aa6.47□□□□□ -1.37
COL4A3BP-201ENST00000261415 SPRR2AP35326 72 aa6.47□□□□□ -1.37
COL4A3BP-201ENST00000261415 MT1GP13640 62 aa6.46□□□□□ -1.37
COL4A3BP-201ENST00000261415 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
COL4A3BP-201ENST00000261415 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
COL4A3BP-201ENST00000261415 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
COL4A3BP-201ENST00000261415 MT1MQ8N339 61 aa6.39□□□□□ -1.39
COL4A3BP-201ENST00000261415 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
COL4A3BP-201ENST00000261415 NEBP20929 6669 aa6.31□□□□□ -1.4
COL4A3BP-201ENST00000261415 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
COL4A3BP-201ENST00000261415 SPRR2DP22532 72 aa6.24□□□□□ -1.41
COL4A3BP-201ENST00000261415 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-201ENST00000261415 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
COL4A3BP-201ENST00000261415 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
COL4A3BP-201ENST00000261415 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
COL4A3BP-201ENST00000261415 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
COL4A3BP-201ENST00000261415 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
COL4A3BP-201ENST00000261415 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
COL4A3BP-201ENST00000261415 MT1AP04731 61 aa5.62□□□□□ -1.51
COL4A3BP-201ENST00000261415 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
COL4A3BP-201ENST00000261415 KRTAP6-1Q3LI64 71 aa5.58□□□□□ -1.52
COL4A3BP-201ENST00000261415 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
COL4A3BP-201ENST00000261415 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-201ENST00000261415 MT4P47944 62 aa5.43□□□□□ -1.54
COL4A3BP-201ENST00000261415 PRM1P04553 51 aa5.43□□□□□ -1.54
COL4A3BP-201ENST00000261415 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
COL4A3BP-201ENST00000261415 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
COL4A3BP-201ENST00000261415 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
COL4A3BP-201ENST00000261415 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
COL4A3BP-201ENST00000261415 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.56
COL4A3BP-201ENST00000261415 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
COL4A3BP-201ENST00000261415 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
COL4A3BP-201ENST00000261415 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
COL4A3BP-201ENST00000261415 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
COL4A3BP-201ENST00000261415 MT3P25713 68 aa5.08□□□□□ -1.6
COL4A3BP-201ENST00000261415 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
COL4A3BP-201ENST00000261415 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
COL4A3BP-201ENST00000261415 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
COL4A3BP-201ENST00000261415 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
COL4A3BP-201ENST00000261415 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
COL4A3BP-201ENST00000261415 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
COL4A3BP-201ENST00000261415 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
COL4A3BP-201ENST00000261415 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
COL4A3BP-201ENST00000261415 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
COL4A3BP-201ENST00000261415 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
COL4A3BP-201ENST00000261415 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
COL4A3BP-201ENST00000261415 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
COL4A3BP-201ENST00000261415 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
COL4A3BP-201ENST00000261415 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
COL4A3BP-201ENST00000261415 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
COL4A3BP-201ENST00000261415 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
COL4A3BP-201ENST00000261415 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
COL4A3BP-201ENST00000261415 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
COL4A3BP-201ENST00000261415 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
COL4A3BP-201ENST00000261415 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
COL4A3BP-201ENST00000261415 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.82
COL4A3BP-201ENST00000261415 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
COL4A3BP-201ENST00000261415 KRTAP21-1Q3LI58 79 aa3.56□□□□□ -1.84
COL4A3BP-201ENST00000261415 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.85
COL4A3BP-201ENST00000261415 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
COL4A3BP-201ENST00000261415 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
COL4A3BP-201ENST00000261415 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
COL4A3BP-201ENST00000261415 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 170.7 ms