RNA–Protein interactions for RNA: ENST00000260276.7

C11orf1-201, Transcript of chromosome 11 open reading frame 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf1, Length 2,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-201ENST00000260276 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
C11orf1-201ENST00000260276 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
C11orf1-201ENST00000260276 INE1O15225 51 aa4.56□□□□□ -1.68
C11orf1-201ENST00000260276 MT1LQ93083 61 aa4.52□□□□□ -1.69
C11orf1-201ENST00000260276 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
C11orf1-201ENST00000260276 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
C11orf1-201ENST00000260276 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
C11orf1-201ENST00000260276 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
C11orf1-201ENST00000260276 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
C11orf1-201ENST00000260276 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
C11orf1-201ENST00000260276 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
C11orf1-201ENST00000260276 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
C11orf1-201ENST00000260276 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
C11orf1-201ENST00000260276 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 MT1MQ8N339 61 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 MT1GP13640 62 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 SPRR2EP22531 72 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 SPRR2BP35325 72 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 SPRR2AP35326 72 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
C11orf1-201ENST00000260276 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
C11orf1-201ENST00000260276 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
C11orf1-201ENST00000260276 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
C11orf1-201ENST00000260276 NEBP20929 6669 aa4.19□□□□□ -1.74
C11orf1-201ENST00000260276 SPRR2DP22532 72 aa4.18□□□□□ -1.74
C11orf1-201ENST00000260276 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
C11orf1-201ENST00000260276 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
C11orf1-201ENST00000260276 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
C11orf1-201ENST00000260276 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
C11orf1-201ENST00000260276 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
C11orf1-201ENST00000260276 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
C11orf1-201ENST00000260276 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
C11orf1-201ENST00000260276 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
C11orf1-201ENST00000260276 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.8
C11orf1-201ENST00000260276 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
C11orf1-201ENST00000260276 MT1AP04731 61 aa3.81□□□□□ -1.8
C11orf1-201ENST00000260276 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
C11orf1-201ENST00000260276 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
C11orf1-201ENST00000260276 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
C11orf1-201ENST00000260276 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
C11orf1-201ENST00000260276 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
C11orf1-201ENST00000260276 MT4P47944 62 aa3.67□□□□□ -1.82
C11orf1-201ENST00000260276 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
C11orf1-201ENST00000260276 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
C11orf1-201ENST00000260276 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
C11orf1-201ENST00000260276 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
C11orf1-201ENST00000260276 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
C11orf1-201ENST00000260276 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
C11orf1-201ENST00000260276 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.85
C11orf1-201ENST00000260276 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
C11orf1-201ENST00000260276 MT3P25713 68 aa3.43□□□□□ -1.86
C11orf1-201ENST00000260276 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
C11orf1-201ENST00000260276 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.86
C11orf1-201ENST00000260276 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
C11orf1-201ENST00000260276 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
C11orf1-201ENST00000260276 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.89
C11orf1-201ENST00000260276 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
C11orf1-201ENST00000260276 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
C11orf1-201ENST00000260276 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
C11orf1-201ENST00000260276 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
C11orf1-201ENST00000260276 PRM1P04553 51 aa2.98□□□□□ -1.93
C11orf1-201ENST00000260276 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
C11orf1-201ENST00000260276 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
C11orf1-201ENST00000260276 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
C11orf1-201ENST00000260276 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
C11orf1-201ENST00000260276 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
C11orf1-201ENST00000260276 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
C11orf1-201ENST00000260276 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
C11orf1-201ENST00000260276 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
C11orf1-201ENST00000260276 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
C11orf1-201ENST00000260276 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
C11orf1-201ENST00000260276 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
C11orf1-201ENST00000260276 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
C11orf1-201ENST00000260276 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
C11orf1-201ENST00000260276 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
C11orf1-201ENST00000260276 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
C11orf1-201ENST00000260276 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 84.4 ms