RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 MT1LQ93083 61 aa6.35□□□□□ -1.39
IMP4-201ENST00000259239 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
IMP4-201ENST00000259239 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
IMP4-201ENST00000259239 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
IMP4-201ENST00000259239 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
IMP4-201ENST00000259239 SPRR2EP22531 72 aa6.21□□□□□ -1.42
IMP4-201ENST00000259239 SPRR2BP35325 72 aa6.21□□□□□ -1.42
IMP4-201ENST00000259239 SPRR2AP35326 72 aa6.21□□□□□ -1.42
IMP4-201ENST00000259239 MT1GP13640 62 aa6.19□□□□□ -1.42
IMP4-201ENST00000259239 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
IMP4-201ENST00000259239 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
IMP4-201ENST00000259239 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
IMP4-201ENST00000259239 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
IMP4-201ENST00000259239 MT1MQ8N339 61 aa6.14□□□□□ -1.43
IMP4-201ENST00000259239 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
IMP4-201ENST00000259239 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
IMP4-201ENST00000259239 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
IMP4-201ENST00000259239 NEBP20929 6669 aa5.99□□□□□ -1.45
IMP4-201ENST00000259239 SPRR2DP22532 72 aa5.98□□□□□ -1.45
IMP4-201ENST00000259239 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
IMP4-201ENST00000259239 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
IMP4-201ENST00000259239 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
IMP4-201ENST00000259239 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
IMP4-201ENST00000259239 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
IMP4-201ENST00000259239 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
IMP4-201ENST00000259239 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
IMP4-201ENST00000259239 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
IMP4-201ENST00000259239 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
IMP4-201ENST00000259239 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
IMP4-201ENST00000259239 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
IMP4-201ENST00000259239 MT1AP04731 61 aa5.39□□□□□ -1.55
IMP4-201ENST00000259239 KRTAP6-1Q3LI64 71 aa5.37□□□□□ -1.55
IMP4-201ENST00000259239 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
IMP4-201ENST00000259239 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
IMP4-201ENST00000259239 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
IMP4-201ENST00000259239 MT4P47944 62 aa5.21□□□□□ -1.58
IMP4-201ENST00000259239 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
IMP4-201ENST00000259239 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
IMP4-201ENST00000259239 INE1O15225 51 aa5.14□□□□□ -1.59
IMP4-201ENST00000259239 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
IMP4-201ENST00000259239 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
IMP4-201ENST00000259239 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
IMP4-201ENST00000259239 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
IMP4-201ENST00000259239 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
IMP4-201ENST00000259239 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
IMP4-201ENST00000259239 MT3P25713 68 aa4.88□□□□□ -1.63
IMP4-201ENST00000259239 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
IMP4-201ENST00000259239 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
IMP4-201ENST00000259239 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
IMP4-201ENST00000259239 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
IMP4-201ENST00000259239 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
IMP4-201ENST00000259239 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
IMP4-201ENST00000259239 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
IMP4-201ENST00000259239 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
IMP4-201ENST00000259239 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
IMP4-201ENST00000259239 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
IMP4-201ENST00000259239 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
IMP4-201ENST00000259239 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
IMP4-201ENST00000259239 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
IMP4-201ENST00000259239 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
IMP4-201ENST00000259239 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
IMP4-201ENST00000259239 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
IMP4-201ENST00000259239 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
IMP4-201ENST00000259239 PRM1P04553 51 aa3.84□□□□□ -1.79
IMP4-201ENST00000259239 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.8
IMP4-201ENST00000259239 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
IMP4-201ENST00000259239 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
IMP4-201ENST00000259239 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
IMP4-201ENST00000259239 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
IMP4-201ENST00000259239 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
IMP4-201ENST00000259239 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
IMP4-201ENST00000259239 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
IMP4-201ENST00000259239 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
IMP4-201ENST00000259239 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
IMP4-201ENST00000259239 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
IMP4-201ENST00000259239 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
IMP4-201ENST00000259239 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 159.3 ms