RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 MT1LQ93083 61 aa3.86□□□□□ -1.79
TROAP-201ENST00000257909 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
TROAP-201ENST00000257909 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
TROAP-201ENST00000257909 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
TROAP-201ENST00000257909 MT1EP04732 61 aa3.81□□□□□ -1.8
TROAP-201ENST00000257909 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
TROAP-201ENST00000257909 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
TROAP-201ENST00000257909 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
TROAP-201ENST00000257909 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
TROAP-201ENST00000257909 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
TROAP-201ENST00000257909 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
TROAP-201ENST00000257909 MT1GP13640 62 aa3.61□□□□□ -1.83
TROAP-201ENST00000257909 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.83
TROAP-201ENST00000257909 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
TROAP-201ENST00000257909 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
TROAP-201ENST00000257909 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
TROAP-201ENST00000257909 MT1MQ8N339 61 aa3.54□□□□□ -1.84
TROAP-201ENST00000257909 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
TROAP-201ENST00000257909 MT1AP04731 61 aa3.44□□□□□ -1.86
TROAP-201ENST00000257909 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
TROAP-201ENST00000257909 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
TROAP-201ENST00000257909 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
TROAP-201ENST00000257909 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
TROAP-201ENST00000257909 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
TROAP-201ENST00000257909 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
TROAP-201ENST00000257909 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
TROAP-201ENST00000257909 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
TROAP-201ENST00000257909 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TROAP-201ENST00000257909 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TROAP-201ENST00000257909 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
TROAP-201ENST00000257909 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TROAP-201ENST00000257909 PRM1P04553 51 aa3.3□□□□□ -1.88
TROAP-201ENST00000257909 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
TROAP-201ENST00000257909 SPRR2FQ96RM1 72 aa3.28□□□□□ -1.88
TROAP-201ENST00000257909 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
TROAP-201ENST00000257909 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
TROAP-201ENST00000257909 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
TROAP-201ENST00000257909 NEBP20929 6669 aa3.24□□□□□ -1.89
TROAP-201ENST00000257909 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
TROAP-201ENST00000257909 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
TROAP-201ENST00000257909 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
TROAP-201ENST00000257909 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
TROAP-201ENST00000257909 MT3P25713 68 aa3.05□□□□□ -1.92
TROAP-201ENST00000257909 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
TROAP-201ENST00000257909 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
TROAP-201ENST00000257909 SPRR2EP22531 72 aa2.94□□□□□ -1.94
TROAP-201ENST00000257909 SPRR2BP35325 72 aa2.94□□□□□ -1.94
TROAP-201ENST00000257909 SPRR2AP35326 72 aa2.94□□□□□ -1.94
TROAP-201ENST00000257909 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
TROAP-201ENST00000257909 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
TROAP-201ENST00000257909 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
TROAP-201ENST00000257909 SPRR2DP22532 72 aa2.8□□□□□ -1.96
TROAP-201ENST00000257909 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
TROAP-201ENST00000257909 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
TROAP-201ENST00000257909 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
TROAP-201ENST00000257909 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
TROAP-201ENST00000257909 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
TROAP-201ENST00000257909 MT4P47944 62 aa2.5□□□□□ -2.01
TROAP-201ENST00000257909 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
TROAP-201ENST00000257909 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
TROAP-201ENST00000257909 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
TROAP-201ENST00000257909 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
TROAP-201ENST00000257909 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
TROAP-201ENST00000257909 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
TROAP-201ENST00000257909 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
TROAP-201ENST00000257909 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
TROAP-201ENST00000257909 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
TROAP-201ENST00000257909 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
TROAP-201ENST00000257909 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
TROAP-201ENST00000257909 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
TROAP-201ENST00000257909 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
TROAP-201ENST00000257909 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
TROAP-201ENST00000257909 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
TROAP-201ENST00000257909 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
TROAP-201ENST00000257909 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
TROAP-201ENST00000257909 PHGR1C9JFL3 82 aa1.59□□□□□ -2.16
TROAP-201ENST00000257909 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 111.6 ms