RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
NIP7-201ENST00000254940 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
NIP7-201ENST00000254940 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
NIP7-201ENST00000254940 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
NIP7-201ENST00000254940 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
NIP7-201ENST00000254940 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
NIP7-201ENST00000254940 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
NIP7-201ENST00000254940 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
NIP7-201ENST00000254940 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
NIP7-201ENST00000254940 INE1O15225 51 aa4.46□□□□□ -1.69
NIP7-201ENST00000254940 NEBP20929 6669 aa4.44□□□□□ -1.7
NIP7-201ENST00000254940 SPRR2EP22531 72 aa4.42□□□□□ -1.7
NIP7-201ENST00000254940 SPRR2BP35325 72 aa4.42□□□□□ -1.7
NIP7-201ENST00000254940 SPRR2AP35326 72 aa4.42□□□□□ -1.7
NIP7-201ENST00000254940 MT1EP04732 61 aa4.41□□□□□ -1.7
NIP7-201ENST00000254940 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
NIP7-201ENST00000254940 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
NIP7-201ENST00000254940 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
NIP7-201ENST00000254940 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.72
NIP7-201ENST00000254940 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
NIP7-201ENST00000254940 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
NIP7-201ENST00000254940 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
NIP7-201ENST00000254940 MT1LQ93083 61 aa4.28□□□□□ -1.72
NIP7-201ENST00000254940 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
NIP7-201ENST00000254940 SPRR2DP22532 72 aa4.25□□□□□ -1.73
NIP7-201ENST00000254940 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
NIP7-201ENST00000254940 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
NIP7-201ENST00000254940 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
NIP7-201ENST00000254940 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
NIP7-201ENST00000254940 MT1MQ8N339 61 aa4.18□□□□□ -1.74
NIP7-201ENST00000254940 MT1GP13640 62 aa4.17□□□□□ -1.74
NIP7-201ENST00000254940 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
NIP7-201ENST00000254940 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
NIP7-201ENST00000254940 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
NIP7-201ENST00000254940 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
NIP7-201ENST00000254940 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
NIP7-201ENST00000254940 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
NIP7-201ENST00000254940 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
NIP7-201ENST00000254940 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
NIP7-201ENST00000254940 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
NIP7-201ENST00000254940 MT4P47944 62 aa3.79□□□□□ -1.8
NIP7-201ENST00000254940 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
NIP7-201ENST00000254940 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
NIP7-201ENST00000254940 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
NIP7-201ENST00000254940 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
NIP7-201ENST00000254940 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
NIP7-201ENST00000254940 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
NIP7-201ENST00000254940 MT1AP04731 61 aa3.6□□□□□ -1.83
NIP7-201ENST00000254940 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
NIP7-201ENST00000254940 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
NIP7-201ENST00000254940 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
NIP7-201ENST00000254940 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
NIP7-201ENST00000254940 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
NIP7-201ENST00000254940 MT3P25713 68 aa3.37□□□□□ -1.87
NIP7-201ENST00000254940 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
NIP7-201ENST00000254940 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
NIP7-201ENST00000254940 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
NIP7-201ENST00000254940 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.89
NIP7-201ENST00000254940 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
NIP7-201ENST00000254940 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
NIP7-201ENST00000254940 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
NIP7-201ENST00000254940 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
NIP7-201ENST00000254940 PRM1P04553 51 aa2.99□□□□□ -1.93
NIP7-201ENST00000254940 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
NIP7-201ENST00000254940 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
NIP7-201ENST00000254940 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
NIP7-201ENST00000254940 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
NIP7-201ENST00000254940 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
NIP7-201ENST00000254940 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
NIP7-201ENST00000254940 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
NIP7-201ENST00000254940 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
NIP7-201ENST00000254940 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
NIP7-201ENST00000254940 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
NIP7-201ENST00000254940 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
NIP7-201ENST00000254940 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
NIP7-201ENST00000254940 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
NIP7-201ENST00000254940 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 84.8 ms