RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 KMT2DO14686 5537 aa4.34□□□□□ -1.71
CLUHP3-201ENST00000254109 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.72
CLUHP3-201ENST00000254109 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
CLUHP3-201ENST00000254109 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
CLUHP3-201ENST00000254109 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
CLUHP3-201ENST00000254109 NEBP20929 6669 aa4.17□□□□□ -1.74
CLUHP3-201ENST00000254109 INE1O15225 51 aa4.13□□□□□ -1.75
CLUHP3-201ENST00000254109 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
CLUHP3-201ENST00000254109 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
CLUHP3-201ENST00000254109 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
CLUHP3-201ENST00000254109 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
CLUHP3-201ENST00000254109 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
CLUHP3-201ENST00000254109 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
CLUHP3-201ENST00000254109 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
CLUHP3-201ENST00000254109 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
CLUHP3-201ENST00000254109 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
CLUHP3-201ENST00000254109 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
CLUHP3-201ENST00000254109 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
CLUHP3-201ENST00000254109 MT1EP04732 61 aa4.05□□□□□ -1.76
CLUHP3-201ENST00000254109 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
CLUHP3-201ENST00000254109 MT1LQ93083 61 aa3.98□□□□□ -1.77
CLUHP3-201ENST00000254109 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
CLUHP3-201ENST00000254109 SPRR2EP22531 72 aa3.96□□□□□ -1.78
CLUHP3-201ENST00000254109 SPRR2BP35325 72 aa3.96□□□□□ -1.78
CLUHP3-201ENST00000254109 SPRR2AP35326 72 aa3.96□□□□□ -1.78
CLUHP3-201ENST00000254109 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
CLUHP3-201ENST00000254109 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
CLUHP3-201ENST00000254109 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
CLUHP3-201ENST00000254109 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
CLUHP3-201ENST00000254109 MT1GP13640 62 aa3.86□□□□□ -1.79
CLUHP3-201ENST00000254109 MT1MQ8N339 61 aa3.83□□□□□ -1.8
CLUHP3-201ENST00000254109 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
CLUHP3-201ENST00000254109 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CLUHP3-201ENST00000254109 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
CLUHP3-201ENST00000254109 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
CLUHP3-201ENST00000254109 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
CLUHP3-201ENST00000254109 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
CLUHP3-201ENST00000254109 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
CLUHP3-201ENST00000254109 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
CLUHP3-201ENST00000254109 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
CLUHP3-201ENST00000254109 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
CLUHP3-201ENST00000254109 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
CLUHP3-201ENST00000254109 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
CLUHP3-201ENST00000254109 MT1AP04731 61 aa3.37□□□□□ -1.87
CLUHP3-201ENST00000254109 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
CLUHP3-201ENST00000254109 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
CLUHP3-201ENST00000254109 MT4P47944 62 aa3.33□□□□□ -1.88
CLUHP3-201ENST00000254109 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
CLUHP3-201ENST00000254109 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
CLUHP3-201ENST00000254109 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
CLUHP3-201ENST00000254109 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
CLUHP3-201ENST00000254109 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
CLUHP3-201ENST00000254109 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
CLUHP3-201ENST00000254109 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
CLUHP3-201ENST00000254109 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CLUHP3-201ENST00000254109 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
CLUHP3-201ENST00000254109 MT3P25713 68 aa3.06□□□□□ -1.92
CLUHP3-201ENST00000254109 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CLUHP3-201ENST00000254109 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
CLUHP3-201ENST00000254109 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
CLUHP3-201ENST00000254109 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CLUHP3-201ENST00000254109 PRM1P04553 51 aa2.85□□□□□ -1.95
CLUHP3-201ENST00000254109 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CLUHP3-201ENST00000254109 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
CLUHP3-201ENST00000254109 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
CLUHP3-201ENST00000254109 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CLUHP3-201ENST00000254109 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
CLUHP3-201ENST00000254109 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CLUHP3-201ENST00000254109 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CLUHP3-201ENST00000254109 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
CLUHP3-201ENST00000254109 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
CLUHP3-201ENST00000254109 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CLUHP3-201ENST00000254109 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
CLUHP3-201ENST00000254109 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CLUHP3-201ENST00000254109 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CLUHP3-201ENST00000254109 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CLUHP3-201ENST00000254109 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 81.8 ms