RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 RPS28P62857 69 aaKnown RBP8.74□□□□□ -1.01
SDF2L1-201ENST00000248958 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
SDF2L1-201ENST00000248958 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
SDF2L1-201ENST00000248958 MT1LQ93083 61 aa8.68□□□□□ -1.02
SDF2L1-201ENST00000248958 A6NED7 52 aa8.67□□□□□ -1.02
SDF2L1-201ENST00000248958 MT1MQ8N339 61 aa8.59□□□□□ -1.03
SDF2L1-201ENST00000248958 DSTQ03001 7570 aaKnown RBP8.58□□□□□ -1.04
SDF2L1-201ENST00000248958 KRTAP12-3P60328 96 aa8.56□□□□□ -1.04
SDF2L1-201ENST00000248958 GPR98Q8WXG9 6306 aa8.54□□□□□ -1.04
SDF2L1-201ENST00000248958 KRTAP4-9Q9BYQ8 210 aa8.44□□□□□ -1.06
SDF2L1-201ENST00000248958 KRTAP23-1A1A580 65 aa8.41□□□□□ -1.06
SDF2L1-201ENST00000248958 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
SDF2L1-201ENST00000248958 KRTAP4-3Q9BYR4 195 aa8.31□□□□□ -1.08
SDF2L1-201ENST00000248958 ROMO1P60602 79 aa8.25□□□□□ -1.09
SDF2L1-201ENST00000248958 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
SDF2L1-201ENST00000248958 LCE1DQ5T752 114 aa8.23□□□□□ -1.09
SDF2L1-201ENST00000248958 LCE4AQ5TA78 99 aa8.22□□□□□ -1.09
SDF2L1-201ENST00000248958 KRTAP4-7Q9BYR0 210 aa8.2□□□□□ -1.1
SDF2L1-201ENST00000248958 HMCN1Q96RW7 5635 aa8.11□□□□□ -1.11
SDF2L1-201ENST00000248958 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
SDF2L1-201ENST00000248958 MT4P47944 62 aa8.07□□□□□ -1.12
SDF2L1-201ENST00000248958 KRTAP5-4Q6L8H1 288 aa8.07□□□□□ -1.12
SDF2L1-201ENST00000248958 LCE3CQ5T5A8 94 aa7.91□□□□□ -1.14
SDF2L1-201ENST00000248958 AHNAK2Q8IVF2 5795 aa7.9□□□□□ -1.14
SDF2L1-201ENST00000248958 KRTAP5-10Q6L8G5 202 aa7.85□□□□□ -1.15
SDF2L1-201ENST00000248958 KRTAP5-5Q701N2 237 aaPredicted RBP7.85□□□□□ -1.15
SDF2L1-201ENST00000248958 KRTAP4-6Q9BYQ5 205 aa7.8□□□□□ -1.16
SDF2L1-201ENST00000248958 LOC100996750A0A140TA64 210 aa7.76□□□□□ -1.17
SDF2L1-201ENST00000248958 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
SDF2L1-201ENST00000248958 KRTAP12-4P60329 112 aa7.64□□□□□ -1.19
SDF2L1-201ENST00000248958 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
SDF2L1-201ENST00000248958 KRTAP20-2Q3LI61 65 aa7.59□□□□□ -1.19
SDF2L1-201ENST00000248958 KRTAP5-7Q6L8G8 165 aa7.59□□□□□ -1.19
SDF2L1-201ENST00000248958 KRTAP5-3Q6L8H2 238 aa7.58□□□□□ -1.2
SDF2L1-201ENST00000248958 SYNE1Q8NF91 8797 aaKnown RBP7.48□□□□□ -1.21
SDF2L1-201ENST00000248958 MT1AP04731 61 aa7.41□□□□□ -1.22
SDF2L1-201ENST00000248958 KRTAP9-6A8MVA2 160 aa7.38□□□□□ -1.23
SDF2L1-201ENST00000248958 KRTAP6-1Q3LI64 71 aa7.31□□□□□ -1.24
SDF2L1-201ENST00000248958 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
SDF2L1-201ENST00000248958 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.26
SDF2L1-201ENST00000248958 KRTAP5-2Q701N4 177 aa7.12□□□□□ -1.27
SDF2L1-201ENST00000248958 KRTAP6-2Q3LI66 62 aa6.94□□□□□ -1.3
SDF2L1-201ENST00000248958 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
SDF2L1-201ENST00000248958 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
SDF2L1-201ENST00000248958 PRAC1Q96KF2 57 aa6.84□□□□□ -1.31
SDF2L1-201ENST00000248958 MT3P25713 68 aa6.79□□□□□ -1.32
SDF2L1-201ENST00000248958 KRTAP5-8O75690 187 aa6.71□□□□□ -1.34
SDF2L1-201ENST00000248958 MUC5BQ9HC84 5762 aaPredicted RBP6.6□□□□□ -1.35
SDF2L1-201ENST00000248958 MUC5ACP98088 5654 aa6.6□□□□□ -1.35
SDF2L1-201ENST00000248958 AHNAKQ09666 5890 aaKnown RBP6.56□□□□□ -1.36
SDF2L1-201ENST00000248958 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
SDF2L1-201ENST00000248958 OBSCNQ5VST9 7968 aa6.51□□□□□ -1.37
SDF2L1-201ENST00000248958 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
SDF2L1-201ENST00000248958 KRTAP5-1Q6L8H4 278 aa6.32□□□□□ -1.4
SDF2L1-201ENST00000248958 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
SDF2L1-201ENST00000248958 LCE1EQ5T753 118 aa6.2□□□□□ -1.42
SDF2L1-201ENST00000248958 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
SDF2L1-201ENST00000248958 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
SDF2L1-201ENST00000248958 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
SDF2L1-201ENST00000248958 LCE1BQ5T7P3 118 aa5.75□□□□□ -1.49
SDF2L1-201ENST00000248958 LCE1CQ5T751 118 aa5.74□□□□□ -1.49
SDF2L1-201ENST00000248958 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
SDF2L1-201ENST00000248958 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.26□□□□□ -1.57
SDF2L1-201ENST00000248958 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
SDF2L1-201ENST00000248958 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
SDF2L1-201ENST00000248958 LCE1FQ5T754 118 aa5.02□□□□□ -1.61
SDF2L1-201ENST00000248958 KRTAP21-2Q3LI59 83 aa4.82□□□□□ -1.64
SDF2L1-201ENST00000248958 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
SDF2L1-201ENST00000248958 PHGR1C9JFL3 82 aa4.58□□□□□ -1.68
SDF2L1-201ENST00000248958 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
SDF2L1-201ENST00000248958 PRM1P04553 51 aa4.2□□□□□ -1.74
SDF2L1-201ENST00000248958 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
SDF2L1-201ENST00000248958 INE1O15225 51 aa3.97□□□□□ -1.77
SDF2L1-201ENST00000248958 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SDF2L1-201ENST00000248958 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
SDF2L1-201ENST00000248958 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
SDF2L1-201ENST00000248958 H3BS24 57 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 86.2 ms