RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 MT1LQ93083 61 aa4.73□□□□□ -1.65
EGR1-201ENST00000239938 MT1EP04732 61 aa4.7□□□□□ -1.66
EGR1-201ENST00000239938 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
EGR1-201ENST00000239938 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
EGR1-201ENST00000239938 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
EGR1-201ENST00000239938 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
EGR1-201ENST00000239938 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
EGR1-201ENST00000239938 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
EGR1-201ENST00000239938 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
EGR1-201ENST00000239938 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
EGR1-201ENST00000239938 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
EGR1-201ENST00000239938 MT1GP13640 62 aa4.48□□□□□ -1.69
EGR1-201ENST00000239938 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
EGR1-201ENST00000239938 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
EGR1-201ENST00000239938 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
EGR1-201ENST00000239938 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
EGR1-201ENST00000239938 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
EGR1-201ENST00000239938 MT1MQ8N339 61 aa4.37□□□□□ -1.71
EGR1-201ENST00000239938 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
EGR1-201ENST00000239938 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
EGR1-201ENST00000239938 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
EGR1-201ENST00000239938 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.73
EGR1-201ENST00000239938 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
EGR1-201ENST00000239938 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
EGR1-201ENST00000239938 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
EGR1-201ENST00000239938 NEBP20929 6669 aa4.07□□□□□ -1.76
EGR1-201ENST00000239938 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
EGR1-201ENST00000239938 MT1AP04731 61 aa4.05□□□□□ -1.76
EGR1-201ENST00000239938 PRM1P04553 51 aa3.98□□□□□ -1.77
EGR1-201ENST00000239938 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
EGR1-201ENST00000239938 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
EGR1-201ENST00000239938 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
EGR1-201ENST00000239938 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
EGR1-201ENST00000239938 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.8
EGR1-201ENST00000239938 SPRR2EP22531 72 aa3.81□□□□□ -1.8
EGR1-201ENST00000239938 SPRR2BP35325 72 aa3.81□□□□□ -1.8
EGR1-201ENST00000239938 SPRR2AP35326 72 aa3.81□□□□□ -1.8
EGR1-201ENST00000239938 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
EGR1-201ENST00000239938 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
EGR1-201ENST00000239938 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
EGR1-201ENST00000239938 SPRR2DP22532 72 aa3.66□□□□□ -1.82
EGR1-201ENST00000239938 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
EGR1-201ENST00000239938 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.84
EGR1-201ENST00000239938 MT3P25713 68 aa3.49□□□□□ -1.85
EGR1-201ENST00000239938 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
EGR1-201ENST00000239938 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
EGR1-201ENST00000239938 MT4P47944 62 aa3.31□□□□□ -1.88
EGR1-201ENST00000239938 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
EGR1-201ENST00000239938 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
EGR1-201ENST00000239938 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
EGR1-201ENST00000239938 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
EGR1-201ENST00000239938 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
EGR1-201ENST00000239938 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
EGR1-201ENST00000239938 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
EGR1-201ENST00000239938 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
EGR1-201ENST00000239938 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
EGR1-201ENST00000239938 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
EGR1-201ENST00000239938 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
EGR1-201ENST00000239938 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
EGR1-201ENST00000239938 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
EGR1-201ENST00000239938 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
EGR1-201ENST00000239938 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
EGR1-201ENST00000239938 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
EGR1-201ENST00000239938 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
EGR1-201ENST00000239938 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
EGR1-201ENST00000239938 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
EGR1-201ENST00000239938 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
EGR1-201ENST00000239938 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
EGR1-201ENST00000239938 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
EGR1-201ENST00000239938 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
EGR1-201ENST00000239938 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
EGR1-201ENST00000239938 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
EGR1-201ENST00000239938 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2.01
EGR1-201ENST00000239938 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
EGR1-201ENST00000239938 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
EGR1-201ENST00000239938 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
EGR1-201ENST00000239938 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms