RNA–Protein interactions for RNA: ENST00000238558.4

GSC-201, Transcript of goosecoid homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSC, Length 1,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSC-201ENST00000238558 KRTAP4-3Q9BYR4 195 aa9.05□□□□□ -0.96
GSC-201ENST00000238558 LCE1DQ5T752 114 aa9□□□□□ -0.97
GSC-201ENST00000238558 LCE4AQ5TA78 99 aa8.98□□□□□ -0.97
GSC-201ENST00000238558 KRTAP12-3P60328 96 aa8.96□□□□□ -0.98
GSC-201ENST00000238558 HMCN1Q96RW7 5635 aa8.93□□□□□ -0.98
GSC-201ENST00000238558 MIR22HGQ0VDD5 57 aa8.93□□□□□ -0.98
GSC-201ENST00000238558 MT4P47944 62 aa8.9□□□□□ -0.98
GSC-201ENST00000238558 KRTAP4-7Q9BYR0 210 aa8.84□□□□□ -0.99
GSC-201ENST00000238558 KRTAP5-4Q6L8H1 288 aa8.83□□□□□ -1
GSC-201ENST00000238558 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
GSC-201ENST00000238558 K7ERS5 55 aa8.75□□□□□ -1.01
GSC-201ENST00000238558 PSPHP1O15172 72 aa8.74□□□□□ -1.01
GSC-201ENST00000238558 V9GYY9 64 aa8.74□□□□□ -1.01
GSC-201ENST00000238558 Q1T7F1 81 aa8.69□□□□□ -1.02
GSC-201ENST00000238558 AHNAK2Q8IVF2 5795 aa8.66□□□□□ -1.02
GSC-201ENST00000238558 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
GSC-201ENST00000238558 KRTAP5-5Q701N2 237 aaPredicted RBP8.49□□□□□ -1.05
GSC-201ENST00000238558 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
GSC-201ENST00000238558 A6NED7 52 aa8.43□□□□□ -1.06
GSC-201ENST00000238558 KRTAP19-4Q3LI73 84 aa8.42□□□□□ -1.06
GSC-201ENST00000238558 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
GSC-201ENST00000238558 KRTAP15-1Q3LI76 137 aa8.37□□□□□ -1.07
GSC-201ENST00000238558 KRTAP5-10Q6L8G5 202 aa8.37□□□□□ -1.07
GSC-201ENST00000238558 KRTAP20-2Q3LI61 65 aa8.33□□□□□ -1.08
GSC-201ENST00000238558 SPRR5A0A1B0GTR4 108 aa8.28□□□□□ -1.08
GSC-201ENST00000238558 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
GSC-201ENST00000238558 KRTAP12-4P60329 112 aa8.26□□□□□ -1.09
GSC-201ENST00000238558 LCE3CQ5T5A8 94 aa8.25□□□□□ -1.09
GSC-201ENST00000238558 SYNE1Q8NF91 8797 aaKnown RBP8.24□□□□□ -1.09
GSC-201ENST00000238558 PCP4P48539 62 aa8.21□□□□□ -1.1
GSC-201ENST00000238558 RPS28P62857 69 aaKnown RBP8.18□□□□□ -1.1
GSC-201ENST00000238558 KRTAP5-3Q6L8H2 238 aa8.18□□□□□ -1.1
GSC-201ENST00000238558 ROMO1P60602 79 aa8.16□□□□□ -1.1
GSC-201ENST00000238558 KRTAP5-7Q6L8G8 165 aa8.05□□□□□ -1.12
GSC-201ENST00000238558 MT1AP04731 61 aa7.89□□□□□ -1.15
GSC-201ENST00000238558 KRTAP6-1Q3LI64 71 aa7.86□□□□□ -1.15
GSC-201ENST00000238558 KRTAP9-6A8MVA2 160 aa7.8□□□□□ -1.16
GSC-201ENST00000238558 KRTAP5-2Q701N4 177 aa7.73□□□□□ -1.17
GSC-201ENST00000238558 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
GSC-201ENST00000238558 KRTAP4-11Q9BYQ6 195 aa7.61□□□□□ -1.19
GSC-201ENST00000238558 KRTAP6-2Q3LI66 62 aa7.51□□□□□ -1.21
GSC-201ENST00000238558 KRTAP5-8O75690 187 aa7.36□□□□□ -1.23
GSC-201ENST00000238558 OBSCNQ5VST9 7968 aa7.31□□□□□ -1.24
GSC-201ENST00000238558 MT3P25713 68 aa7.22□□□□□ -1.25
GSC-201ENST00000238558 BRK1Q8WUW1 75 aa7.15□□□□□ -1.26
GSC-201ENST00000238558 AHNAKQ09666 5890 aaKnown RBP7.14□□□□□ -1.27
GSC-201ENST00000238558 MUC5BQ9HC84 5762 aaPredicted RBP7.12□□□□□ -1.27
GSC-201ENST00000238558 MUC5ACP98088 5654 aa7.06□□□□□ -1.28
GSC-201ENST00000238558 KRTAP9-9Q9BYP9 154 aa6.97□□□□□ -1.29
GSC-201ENST00000238558 KRTAP5-1Q6L8H4 278 aa6.94□□□□□ -1.3
GSC-201ENST00000238558 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
GSC-201ENST00000238558 LCE1EQ5T753 118 aa6.63□□□□□ -1.35
GSC-201ENST00000238558 PRAC1Q96KF2 57 aa6.53□□□□□ -1.36
GSC-201ENST00000238558 PRO0628Q9UI54 55 aa6.39□□□□□ -1.39
GSC-201ENST00000238558 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
GSC-201ENST00000238558 LCE1BQ5T7P3 118 aa6.26□□□□□ -1.41
GSC-201ENST00000238558 LCE1CQ5T751 118 aa6.16□□□□□ -1.42
GSC-201ENST00000238558 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
GSC-201ENST00000238558 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
GSC-201ENST00000238558 H3BS24 57 aa5.88□□□□□ -1.47
GSC-201ENST00000238558 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
GSC-201ENST00000238558 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
GSC-201ENST00000238558 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.6□□□□□ -1.51
GSC-201ENST00000238558 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
GSC-201ENST00000238558 KRTAP5-11Q6L8G4 156 aa5.57□□□□□ -1.52
GSC-201ENST00000238558 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
GSC-201ENST00000238558 LCE1FQ5T754 118 aa5.42□□□□□ -1.54
GSC-201ENST00000238558 KRTAP21-2Q3LI59 83 aa5.18□□□□□ -1.58
GSC-201ENST00000238558 PHGR1C9JFL3 82 aa4.87□□□□□ -1.63
GSC-201ENST00000238558 KRTAP4-4Q9BYR3 166 aa4.76□□□□□ -1.65
GSC-201ENST00000238558 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
GSC-201ENST00000238558 MUC19Q7Z5P9 8384 aa4.52□□□□□ -1.69
GSC-201ENST00000238558 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
GSC-201ENST00000238558 PRM1P04553 51 aa4.17□□□□□ -1.74
GSC-201ENST00000238558 KRTAP21-1Q3LI58 79 aa3.69□□□□□ -1.82
GSC-201ENST00000238558 INE1O15225 51 aa3.64□□□□□ -1.83
GSC-201ENST00000238558 MUC16Q8WXI7 14507 aa3.23□□□□□ -1.89
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms