RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 USH2AO75445 5202 aa2.65□□□□□ -1.98
AFP-201ENST00000226359 H0YAA0 97 aa2.63□□□□□ -1.99
AFP-201ENST00000226359 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
AFP-201ENST00000226359 P0C880 135 aa2.6□□□□□ -1.99
AFP-201ENST00000226359 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
AFP-201ENST00000226359 CRIPTQ9P021 101 aa2.58□□□□□ -2
AFP-201ENST00000226359 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
AFP-201ENST00000226359 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
AFP-201ENST00000226359 KRTAP5-8O75690 187 aa2.56□□□□□ -2
AFP-201ENST00000226359 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
AFP-201ENST00000226359 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
AFP-201ENST00000226359 A0A0D9SG42 100 aa2.5□□□□□ -2.01
AFP-201ENST00000226359 M0QZ58 72 aa2.5□□□□□ -2.01
AFP-201ENST00000226359 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
AFP-201ENST00000226359 MT1BP07438 61 aa2.48□□□□□ -2.01
AFP-201ENST00000226359 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
AFP-201ENST00000226359 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
AFP-201ENST00000226359 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
AFP-201ENST00000226359 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
AFP-201ENST00000226359 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
AFP-201ENST00000226359 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
AFP-201ENST00000226359 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
AFP-201ENST00000226359 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
AFP-201ENST00000226359 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
AFP-201ENST00000226359 MT1XP80297 61 aa2.34□□□□□ -2.04
AFP-201ENST00000226359 NEBP20929 6669 aa2.33□□□□□ -2.04
AFP-201ENST00000226359 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
AFP-201ENST00000226359 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
AFP-201ENST00000226359 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
AFP-201ENST00000226359 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
AFP-201ENST00000226359 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
AFP-201ENST00000226359 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
AFP-201ENST00000226359 SPRR2EP22531 72 aa2.28□□□□□ -2.04
AFP-201ENST00000226359 SPRR2BP35325 72 aa2.28□□□□□ -2.04
AFP-201ENST00000226359 SPRR2AP35326 72 aa2.28□□□□□ -2.04
AFP-201ENST00000226359 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
AFP-201ENST00000226359 KMT2DO14686 5537 aa2.26□□□□□ -2.05
AFP-201ENST00000226359 TNP1P09430 55 aa2.23□□□□□ -2.05
AFP-201ENST00000226359 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
AFP-201ENST00000226359 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
AFP-201ENST00000226359 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
AFP-201ENST00000226359 SPRR2DP22532 72 aa2.21□□□□□ -2.06
AFP-201ENST00000226359 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
AFP-201ENST00000226359 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
AFP-201ENST00000226359 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
AFP-201ENST00000226359 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
AFP-201ENST00000226359 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
AFP-201ENST00000226359 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.06
AFP-201ENST00000226359 INE1O15225 51 aa2.13□□□□□ -2.07
AFP-201ENST00000226359 MT1EP04732 61 aa2.09□□□□□ -2.08
AFP-201ENST00000226359 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
AFP-201ENST00000226359 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
AFP-201ENST00000226359 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
AFP-201ENST00000226359 MT1GP13640 62 aa2.03□□□□□ -2.08
AFP-201ENST00000226359 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
AFP-201ENST00000226359 MT1LQ93083 61 aa1.99□□□□□ -2.09
AFP-201ENST00000226359 MT1MQ8N339 61 aa1.99□□□□□ -2.09
AFP-201ENST00000226359 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
AFP-201ENST00000226359 MT4P47944 62 aa1.9□□□□□ -2.11
AFP-201ENST00000226359 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
AFP-201ENST00000226359 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
AFP-201ENST00000226359 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
AFP-201ENST00000226359 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.13
AFP-201ENST00000226359 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
AFP-201ENST00000226359 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
AFP-201ENST00000226359 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
AFP-201ENST00000226359 MT1AP04731 61 aa1.72□□□□□ -2.13
AFP-201ENST00000226359 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
AFP-201ENST00000226359 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
AFP-201ENST00000226359 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
AFP-201ENST00000226359 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
AFP-201ENST00000226359 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
AFP-201ENST00000226359 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
AFP-201ENST00000226359 PRM1P04553 51 aa1.38□□□□□ -2.19
AFP-201ENST00000226359 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
AFP-201ENST00000226359 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
AFP-201ENST00000226359 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms