RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 MT1LQ93083 61 aa5.27□□□□□ -1.57
VTN-201ENST00000226218 MT1EP04732 61 aa5.23□□□□□ -1.57
VTN-201ENST00000226218 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
VTN-201ENST00000226218 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
VTN-201ENST00000226218 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
VTN-201ENST00000226218 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
VTN-201ENST00000226218 FCGBPQ9Y6R7 5405 aaPredicted RBP4.97□□□□□ -1.61
VTN-201ENST00000226218 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
VTN-201ENST00000226218 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
VTN-201ENST00000226218 MT1GP13640 62 aa4.9□□□□□ -1.62
VTN-201ENST00000226218 MT1MQ8N339 61 aa4.86□□□□□ -1.63
VTN-201ENST00000226218 KRTAP12-4P60329 112 aa4.84□□□□□ -1.64
VTN-201ENST00000226218 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
VTN-201ENST00000226218 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
VTN-201ENST00000226218 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
VTN-201ENST00000226218 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
VTN-201ENST00000226218 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
VTN-201ENST00000226218 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
VTN-201ENST00000226218 MT1AP04731 61 aa4.58□□□□□ -1.68
VTN-201ENST00000226218 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
VTN-201ENST00000226218 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
VTN-201ENST00000226218 NEBP20929 6669 aa4.51□□□□□ -1.69
VTN-201ENST00000226218 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
VTN-201ENST00000226218 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
VTN-201ENST00000226218 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
VTN-201ENST00000226218 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
VTN-201ENST00000226218 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
VTN-201ENST00000226218 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
VTN-201ENST00000226218 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
VTN-201ENST00000226218 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
VTN-201ENST00000226218 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
VTN-201ENST00000226218 PRM1P04553 51 aa4.33□□□□□ -1.72
VTN-201ENST00000226218 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
VTN-201ENST00000226218 SPRR2EP22531 72 aa4.3□□□□□ -1.72
VTN-201ENST00000226218 SPRR2BP35325 72 aa4.3□□□□□ -1.72
VTN-201ENST00000226218 SPRR2AP35326 72 aa4.3□□□□□ -1.72
VTN-201ENST00000226218 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
VTN-201ENST00000226218 SPRR2DP22532 72 aa4.16□□□□□ -1.74
VTN-201ENST00000226218 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
VTN-201ENST00000226218 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
VTN-201ENST00000226218 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
VTN-201ENST00000226218 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
VTN-201ENST00000226218 MT3P25713 68 aa3.92□□□□□ -1.78
VTN-201ENST00000226218 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
VTN-201ENST00000226218 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
VTN-201ENST00000226218 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
VTN-201ENST00000226218 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
VTN-201ENST00000226218 MT4P47944 62 aa3.64□□□□□ -1.83
VTN-201ENST00000226218 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
VTN-201ENST00000226218 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
VTN-201ENST00000226218 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
VTN-201ENST00000226218 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
VTN-201ENST00000226218 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
VTN-201ENST00000226218 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
VTN-201ENST00000226218 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
VTN-201ENST00000226218 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
VTN-201ENST00000226218 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
VTN-201ENST00000226218 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
VTN-201ENST00000226218 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
VTN-201ENST00000226218 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
VTN-201ENST00000226218 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
VTN-201ENST00000226218 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
VTN-201ENST00000226218 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
VTN-201ENST00000226218 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
VTN-201ENST00000226218 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
VTN-201ENST00000226218 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
VTN-201ENST00000226218 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
VTN-201ENST00000226218 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
VTN-201ENST00000226218 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
VTN-201ENST00000226218 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
VTN-201ENST00000226218 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
VTN-201ENST00000226218 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
VTN-201ENST00000226218 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
VTN-201ENST00000226218 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
VTN-201ENST00000226218 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
VTN-201ENST00000226218 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
VTN-201ENST00000226218 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms