RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
SEC61B-201ENST00000223641 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
SEC61B-201ENST00000223641 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
SEC61B-201ENST00000223641 SPRR2EP22531 72 aa5.03□□□□□ -1.6
SEC61B-201ENST00000223641 SPRR2BP35325 72 aa5.03□□□□□ -1.6
SEC61B-201ENST00000223641 SPRR2AP35326 72 aa5.03□□□□□ -1.6
SEC61B-201ENST00000223641 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
SEC61B-201ENST00000223641 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
SEC61B-201ENST00000223641 MT1LQ93083 61 aa5.02□□□□□ -1.61
SEC61B-201ENST00000223641 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
SEC61B-201ENST00000223641 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
SEC61B-201ENST00000223641 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
SEC61B-201ENST00000223641 MT1GP13640 62 aa4.97□□□□□ -1.61
SEC61B-201ENST00000223641 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
SEC61B-201ENST00000223641 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
SEC61B-201ENST00000223641 MT1MQ8N339 61 aa4.88□□□□□ -1.63
SEC61B-201ENST00000223641 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
SEC61B-201ENST00000223641 SPRR2DP22532 72 aa4.85□□□□□ -1.63
SEC61B-201ENST00000223641 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
SEC61B-201ENST00000223641 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
SEC61B-201ENST00000223641 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
SEC61B-201ENST00000223641 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
SEC61B-201ENST00000223641 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
SEC61B-201ENST00000223641 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
SEC61B-201ENST00000223641 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
SEC61B-201ENST00000223641 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
SEC61B-201ENST00000223641 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
SEC61B-201ENST00000223641 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
SEC61B-201ENST00000223641 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
SEC61B-201ENST00000223641 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
SEC61B-201ENST00000223641 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
SEC61B-201ENST00000223641 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
SEC61B-201ENST00000223641 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
SEC61B-201ENST00000223641 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
SEC61B-201ENST00000223641 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
SEC61B-201ENST00000223641 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
SEC61B-201ENST00000223641 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
SEC61B-201ENST00000223641 H3BS24 57 aa4.32□□□□□ -1.72
SEC61B-201ENST00000223641 MT1AP04731 61 aa4.28□□□□□ -1.72
SEC61B-201ENST00000223641 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
SEC61B-201ENST00000223641 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
SEC61B-201ENST00000223641 MT4P47944 62 aa4.2□□□□□ -1.74
SEC61B-201ENST00000223641 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
SEC61B-201ENST00000223641 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
SEC61B-201ENST00000223641 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
SEC61B-201ENST00000223641 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
SEC61B-201ENST00000223641 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
SEC61B-201ENST00000223641 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
SEC61B-201ENST00000223641 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SEC61B-201ENST00000223641 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SEC61B-201ENST00000223641 MT3P25713 68 aa3.88□□□□□ -1.79
SEC61B-201ENST00000223641 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
SEC61B-201ENST00000223641 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
SEC61B-201ENST00000223641 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
SEC61B-201ENST00000223641 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
SEC61B-201ENST00000223641 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
SEC61B-201ENST00000223641 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
SEC61B-201ENST00000223641 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
SEC61B-201ENST00000223641 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
SEC61B-201ENST00000223641 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SEC61B-201ENST00000223641 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SEC61B-201ENST00000223641 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
SEC61B-201ENST00000223641 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
SEC61B-201ENST00000223641 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SEC61B-201ENST00000223641 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
SEC61B-201ENST00000223641 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SEC61B-201ENST00000223641 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SEC61B-201ENST00000223641 INE1O15225 51 aa3.19□□□□□ -1.9
SEC61B-201ENST00000223641 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
SEC61B-201ENST00000223641 PRM1P04553 51 aa2.82□□□□□ -1.96
SEC61B-201ENST00000223641 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
SEC61B-201ENST00000223641 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SEC61B-201ENST00000223641 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SEC61B-201ENST00000223641 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SEC61B-201ENST00000223641 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SEC61B-201ENST00000223641 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SEC61B-201ENST00000223641 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 126.7 ms