RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 H3BS24 57 aa8.37□□□□□ -1.07
USF2-201ENST00000222305 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
USF2-201ENST00000222305 SPRR2EP22531 72 aa8.27□□□□□ -1.09
USF2-201ENST00000222305 SPRR2BP35325 72 aa8.27□□□□□ -1.09
USF2-201ENST00000222305 SPRR2AP35326 72 aa8.27□□□□□ -1.09
USF2-201ENST00000222305 LCE1AQ5T7P2 110 aa8.24□□□□□ -1.09
USF2-201ENST00000222305 MT1LQ93083 61 aa8.21□□□□□ -1.1
USF2-201ENST00000222305 KRTAP15-1Q3LI76 137 aa8.19□□□□□ -1.1
USF2-201ENST00000222305 KRTAP19-3Q7Z4W3 81 aa8.18□□□□□ -1.1
USF2-201ENST00000222305 NEBP20929 6669 aa8.11□□□□□ -1.11
USF2-201ENST00000222305 KRTAP4-12Q9BQ66 201 aa8.1□□□□□ -1.11
USF2-201ENST00000222305 LCE5AQ5TCM9 118 aa8.08□□□□□ -1.12
USF2-201ENST00000222305 MT1GP13640 62 aa8.05□□□□□ -1.12
USF2-201ENST00000222305 MT1MQ8N339 61 aa7.98□□□□□ -1.13
USF2-201ENST00000222305 SPRR2DP22532 72 aa7.97□□□□□ -1.13
USF2-201ENST00000222305 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
USF2-201ENST00000222305 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
USF2-201ENST00000222305 KRTAP19-4Q3LI73 84 aa7.88□□□□□ -1.15
USF2-201ENST00000222305 LCE3CQ5T5A8 94 aa7.88□□□□□ -1.15
USF2-201ENST00000222305 KRTAP4-3Q9BYR4 195 aa7.84□□□□□ -1.15
USF2-201ENST00000222305 KRTAP9-9Q9BYP9 154 aa7.74□□□□□ -1.17
USF2-201ENST00000222305 KRTAP9-4Q9BYQ2 154 aa7.74□□□□□ -1.17
USF2-201ENST00000222305 DSTQ03001 7570 aaKnown RBP7.72□□□□□ -1.17
USF2-201ENST00000222305 KRTAP20-1Q3LI63 56 aa7.71□□□□□ -1.17
USF2-201ENST00000222305 KRTAP2-3P0C7H8 128 aa7.68□□□□□ -1.18
USF2-201ENST00000222305 KRTAP2-4Q9BYR9 128 aa7.68□□□□□ -1.18
USF2-201ENST00000222305 LCE4AQ5TA78 99 aa7.52□□□□□ -1.2
USF2-201ENST00000222305 KRTAP2-2Q9BYT5 123 aa7.49□□□□□ -1.21
USF2-201ENST00000222305 KRTAP2-1Q9BYU5 128 aa7.49□□□□□ -1.21
USF2-201ENST00000222305 KRTAP9-6A8MVA2 160 aa7.48□□□□□ -1.21
USF2-201ENST00000222305 SPRR5A0A1B0GTR4 108 aa7.47□□□□□ -1.21
USF2-201ENST00000222305 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
USF2-201ENST00000222305 KRTAP5-5Q701N2 237 aaPredicted RBP7.22□□□□□ -1.25
USF2-201ENST00000222305 KRTAP4-9Q9BYQ8 210 aa7.18□□□□□ -1.26
USF2-201ENST00000222305 KRTAP5-4Q6L8H1 288 aa7.05□□□□□ -1.28
USF2-201ENST00000222305 LUZP6Q538Z0 58 aa7.01□□□□□ -1.29
USF2-201ENST00000222305 MT1AP04731 61 aa6.98□□□□□ -1.29
USF2-201ENST00000222305 MT4P47944 62 aa6.98□□□□□ -1.29
USF2-201ENST00000222305 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
USF2-201ENST00000222305 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
USF2-201ENST00000222305 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
USF2-201ENST00000222305 SYNE1Q8NF91 8797 aaKnown RBP6.88□□□□□ -1.31
USF2-201ENST00000222305 KRTAP12-4P60329 112 aa6.77□□□□□ -1.33
USF2-201ENST00000222305 HMCN1Q96RW7 5635 aa6.73□□□□□ -1.33
USF2-201ENST00000222305 NDUFAF8A1L188 74 aa6.65□□□□□ -1.34
USF2-201ENST00000222305 KRTAP20-2Q3LI61 65 aa6.65□□□□□ -1.35
USF2-201ENST00000222305 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
USF2-201ENST00000222305 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
USF2-201ENST00000222305 KRTAP5-2Q701N4 177 aa6.34□□□□□ -1.39
USF2-201ENST00000222305 MT3P25713 68 aa6.32□□□□□ -1.4
USF2-201ENST00000222305 AHNAK2Q8IVF2 5795 aa6.19□□□□□ -1.42
USF2-201ENST00000222305 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
USF2-201ENST00000222305 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
USF2-201ENST00000222305 OBSCNQ5VST9 7968 aa5.97□□□□□ -1.45
USF2-201ENST00000222305 GPR98Q8WXG9 6306 aa5.92□□□□□ -1.46
USF2-201ENST00000222305 LCE3DQ9BYE3 92 aa5.85□□□□□ -1.47
USF2-201ENST00000222305 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
USF2-201ENST00000222305 LCE3EQ5T5B0 92 aa5.64□□□□□ -1.51
USF2-201ENST00000222305 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
USF2-201ENST00000222305 INE1O15225 51 aa5.58□□□□□ -1.52
USF2-201ENST00000222305 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
USF2-201ENST00000222305 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
USF2-201ENST00000222305 MUC5ACP98088 5654 aa5.32□□□□□ -1.56
USF2-201ENST00000222305 LCE1BQ5T7P3 118 aa5.27□□□□□ -1.57
USF2-201ENST00000222305 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
USF2-201ENST00000222305 MUC5BQ9HC84 5762 aaPredicted RBP4.97□□□□□ -1.61
USF2-201ENST00000222305 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
USF2-201ENST00000222305 PRM1P04553 51 aa4.78□□□□□ -1.64
USF2-201ENST00000222305 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
USF2-201ENST00000222305 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
USF2-201ENST00000222305 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
USF2-201ENST00000222305 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
USF2-201ENST00000222305 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
USF2-201ENST00000222305 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
USF2-201ENST00000222305 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
USF2-201ENST00000222305 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
USF2-201ENST00000222305 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 76 ms