RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
SF3A2-201ENST00000221494 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SF3A2-201ENST00000221494 MT1EP04732 61 aa5.43□□□□□ -1.54
SF3A2-201ENST00000221494 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
SF3A2-201ENST00000221494 MT1LQ93083 61 aa5.4□□□□□ -1.54
SF3A2-201ENST00000221494 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
SF3A2-201ENST00000221494 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
SF3A2-201ENST00000221494 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
SF3A2-201ENST00000221494 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
SF3A2-201ENST00000221494 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
SF3A2-201ENST00000221494 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
SF3A2-201ENST00000221494 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
SF3A2-201ENST00000221494 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
SF3A2-201ENST00000221494 MT1GP13640 62 aa5.16□□□□□ -1.58
SF3A2-201ENST00000221494 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
SF3A2-201ENST00000221494 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
SF3A2-201ENST00000221494 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
SF3A2-201ENST00000221494 MT1MQ8N339 61 aa5.11□□□□□ -1.59
SF3A2-201ENST00000221494 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.6
SF3A2-201ENST00000221494 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
SF3A2-201ENST00000221494 SPRR2EP22531 72 aa5.01□□□□□ -1.61
SF3A2-201ENST00000221494 SPRR2BP35325 72 aa5.01□□□□□ -1.61
SF3A2-201ENST00000221494 SPRR2AP35326 72 aa5.01□□□□□ -1.61
SF3A2-201ENST00000221494 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
SF3A2-201ENST00000221494 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
SF3A2-201ENST00000221494 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
SF3A2-201ENST00000221494 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.62
SF3A2-201ENST00000221494 SPRR2DP22532 72 aa4.82□□□□□ -1.64
SF3A2-201ENST00000221494 MT1AP04731 61 aa4.81□□□□□ -1.64
SF3A2-201ENST00000221494 NEBP20929 6669 aa4.81□□□□□ -1.64
SF3A2-201ENST00000221494 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
SF3A2-201ENST00000221494 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
SF3A2-201ENST00000221494 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SF3A2-201ENST00000221494 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
SF3A2-201ENST00000221494 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
SF3A2-201ENST00000221494 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
SF3A2-201ENST00000221494 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
SF3A2-201ENST00000221494 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
SF3A2-201ENST00000221494 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
SF3A2-201ENST00000221494 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
SF3A2-201ENST00000221494 PRM1P04553 51 aa4.4□□□□□ -1.71
SF3A2-201ENST00000221494 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
SF3A2-201ENST00000221494 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
SF3A2-201ENST00000221494 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
SF3A2-201ENST00000221494 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
SF3A2-201ENST00000221494 MT4P47944 62 aa4.2□□□□□ -1.74
SF3A2-201ENST00000221494 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
SF3A2-201ENST00000221494 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
SF3A2-201ENST00000221494 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
SF3A2-201ENST00000221494 MT3P25713 68 aa4.11□□□□□ -1.75
SF3A2-201ENST00000221494 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
SF3A2-201ENST00000221494 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
SF3A2-201ENST00000221494 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
SF3A2-201ENST00000221494 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
SF3A2-201ENST00000221494 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
SF3A2-201ENST00000221494 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
SF3A2-201ENST00000221494 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
SF3A2-201ENST00000221494 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
SF3A2-201ENST00000221494 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
SF3A2-201ENST00000221494 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
SF3A2-201ENST00000221494 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
SF3A2-201ENST00000221494 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
SF3A2-201ENST00000221494 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SF3A2-201ENST00000221494 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
SF3A2-201ENST00000221494 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
SF3A2-201ENST00000221494 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
SF3A2-201ENST00000221494 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
SF3A2-201ENST00000221494 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
SF3A2-201ENST00000221494 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
SF3A2-201ENST00000221494 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
SF3A2-201ENST00000221494 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
SF3A2-201ENST00000221494 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SF3A2-201ENST00000221494 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
SF3A2-201ENST00000221494 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
SF3A2-201ENST00000221494 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SF3A2-201ENST00000221494 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
SF3A2-201ENST00000221494 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms