RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
PAF1-201ENST00000221265 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
PAF1-201ENST00000221265 MT1LQ93083 61 aa5.38□□□□□ -1.55
PAF1-201ENST00000221265 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
PAF1-201ENST00000221265 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
PAF1-201ENST00000221265 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
PAF1-201ENST00000221265 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
PAF1-201ENST00000221265 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
PAF1-201ENST00000221265 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
PAF1-201ENST00000221265 MT1GP13640 62 aa5.18□□□□□ -1.58
PAF1-201ENST00000221265 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
PAF1-201ENST00000221265 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
PAF1-201ENST00000221265 MT1MQ8N339 61 aa5.17□□□□□ -1.58
PAF1-201ENST00000221265 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
PAF1-201ENST00000221265 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
PAF1-201ENST00000221265 SPRR2EP22531 72 aa5.12□□□□□ -1.59
PAF1-201ENST00000221265 SPRR2BP35325 72 aa5.12□□□□□ -1.59
PAF1-201ENST00000221265 SPRR2AP35326 72 aa5.12□□□□□ -1.59
PAF1-201ENST00000221265 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.6
PAF1-201ENST00000221265 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
PAF1-201ENST00000221265 INE1O15225 51 aa5.03□□□□□ -1.6
PAF1-201ENST00000221265 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.61
PAF1-201ENST00000221265 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
PAF1-201ENST00000221265 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
PAF1-201ENST00000221265 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
PAF1-201ENST00000221265 NEBP20929 6669 aa4.94□□□□□ -1.62
PAF1-201ENST00000221265 SPRR2DP22532 72 aa4.92□□□□□ -1.62
PAF1-201ENST00000221265 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
PAF1-201ENST00000221265 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
PAF1-201ENST00000221265 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
PAF1-201ENST00000221265 MT1AP04731 61 aa4.53□□□□□ -1.68
PAF1-201ENST00000221265 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
PAF1-201ENST00000221265 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
PAF1-201ENST00000221265 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
PAF1-201ENST00000221265 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
PAF1-201ENST00000221265 MT4P47944 62 aa4.32□□□□□ -1.72
PAF1-201ENST00000221265 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
PAF1-201ENST00000221265 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
PAF1-201ENST00000221265 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
PAF1-201ENST00000221265 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
PAF1-201ENST00000221265 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
PAF1-201ENST00000221265 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
PAF1-201ENST00000221265 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
PAF1-201ENST00000221265 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
PAF1-201ENST00000221265 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
PAF1-201ENST00000221265 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
PAF1-201ENST00000221265 MT3P25713 68 aa4.09□□□□□ -1.76
PAF1-201ENST00000221265 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
PAF1-201ENST00000221265 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
PAF1-201ENST00000221265 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
PAF1-201ENST00000221265 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
PAF1-201ENST00000221265 PRM1P04553 51 aa3.8□□□□□ -1.8
PAF1-201ENST00000221265 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
PAF1-201ENST00000221265 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
PAF1-201ENST00000221265 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
PAF1-201ENST00000221265 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
PAF1-201ENST00000221265 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
PAF1-201ENST00000221265 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
PAF1-201ENST00000221265 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
PAF1-201ENST00000221265 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
PAF1-201ENST00000221265 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.86
PAF1-201ENST00000221265 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
PAF1-201ENST00000221265 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
PAF1-201ENST00000221265 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
PAF1-201ENST00000221265 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
PAF1-201ENST00000221265 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
PAF1-201ENST00000221265 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
PAF1-201ENST00000221265 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PAF1-201ENST00000221265 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
PAF1-201ENST00000221265 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
PAF1-201ENST00000221265 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
PAF1-201ENST00000221265 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
PAF1-201ENST00000221265 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
PAF1-201ENST00000221265 PHGR1C9JFL3 82 aa2.53□□□□□ -2
PAF1-201ENST00000221265 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
PAF1-201ENST00000221265 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
PAF1-201ENST00000221265 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 24.8 ms