RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 A0A1B0GU33 70 aa5.39□□□□□ -1.55
NME3-201ENST00000219302 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
NME3-201ENST00000219302 TMEM258P61165 79 aa5.38□□□□□ -1.55
NME3-201ENST00000219302 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
NME3-201ENST00000219302 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
NME3-201ENST00000219302 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
NME3-201ENST00000219302 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
NME3-201ENST00000219302 TNP1P09430 55 aa5.27□□□□□ -1.57
NME3-201ENST00000219302 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
NME3-201ENST00000219302 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
NME3-201ENST00000219302 SMIM26A0A096LP01 95 aa5.22□□□□□ -1.57
NME3-201ENST00000219302 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
NME3-201ENST00000219302 A8MU10 97 aa5.22□□□□□ -1.57
NME3-201ENST00000219302 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
NME3-201ENST00000219302 A0A1B0GU69 56 aa5.12□□□□□ -1.59
NME3-201ENST00000219302 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
NME3-201ENST00000219302 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
NME3-201ENST00000219302 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
NME3-201ENST00000219302 V9GYY9 64 aa5.02□□□□□ -1.61
NME3-201ENST00000219302 Q1T7F1 81 aa5□□□□□ -1.61
NME3-201ENST00000219302 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
NME3-201ENST00000219302 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
NME3-201ENST00000219302 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
NME3-201ENST00000219302 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
NME3-201ENST00000219302 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
NME3-201ENST00000219302 UQCR11O14957 56 aa4.82□□□□□ -1.64
NME3-201ENST00000219302 PSPHP1O15172 72 aa4.81□□□□□ -1.64
NME3-201ENST00000219302 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
NME3-201ENST00000219302 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
NME3-201ENST00000219302 MT1AP04731 61 aa4.74□□□□□ -1.65
NME3-201ENST00000219302 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
NME3-201ENST00000219302 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
NME3-201ENST00000219302 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
NME3-201ENST00000219302 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
NME3-201ENST00000219302 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
NME3-201ENST00000219302 MUC5ACP98088 5654 aa4.71□□□□□ -1.65
NME3-201ENST00000219302 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
NME3-201ENST00000219302 A6NED7 52 aa4.69□□□□□ -1.66
NME3-201ENST00000219302 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
NME3-201ENST00000219302 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
NME3-201ENST00000219302 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
NME3-201ENST00000219302 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
NME3-201ENST00000219302 K7ERS5 55 aa4.61□□□□□ -1.67
NME3-201ENST00000219302 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
NME3-201ENST00000219302 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
NME3-201ENST00000219302 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
NME3-201ENST00000219302 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
NME3-201ENST00000219302 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
NME3-201ENST00000219302 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
NME3-201ENST00000219302 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
NME3-201ENST00000219302 MT3P25713 68 aa4.34□□□□□ -1.71
NME3-201ENST00000219302 ROMO1P60602 79 aa4.32□□□□□ -1.72
NME3-201ENST00000219302 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
NME3-201ENST00000219302 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
NME3-201ENST00000219302 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
NME3-201ENST00000219302 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
NME3-201ENST00000219302 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
NME3-201ENST00000219302 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
NME3-201ENST00000219302 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
NME3-201ENST00000219302 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
NME3-201ENST00000219302 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
NME3-201ENST00000219302 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
NME3-201ENST00000219302 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
NME3-201ENST00000219302 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
NME3-201ENST00000219302 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
NME3-201ENST00000219302 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
NME3-201ENST00000219302 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
NME3-201ENST00000219302 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
NME3-201ENST00000219302 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
NME3-201ENST00000219302 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
NME3-201ENST00000219302 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
NME3-201ENST00000219302 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
NME3-201ENST00000219302 INE1O15225 51 aa2.75□□□□□ -1.97
NME3-201ENST00000219302 H3BS24 57 aa2.74□□□□□ -1.97
NME3-201ENST00000219302 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
NME3-201ENST00000219302 PRM1P04553 51 aa2.23□□□□□ -2.05
NME3-201ENST00000219302 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms