RNA–Protein interactions for RNA: ENST00000216366.8

AP4S1-201, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 1 (best) BASIC

Gene AP4S1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-201ENST00000216366 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
AP4S1-201ENST00000216366 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
AP4S1-201ENST00000216366 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
AP4S1-201ENST00000216366 INE1O15225 51 aa4.36□□□□□ -1.71
AP4S1-201ENST00000216366 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
AP4S1-201ENST00000216366 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
AP4S1-201ENST00000216366 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
AP4S1-201ENST00000216366 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
AP4S1-201ENST00000216366 KMT2DO14686 5537 aa4.07□□□□□ -1.76
AP4S1-201ENST00000216366 USH2AO75445 5202 aa4.05□□□□□ -1.76
AP4S1-201ENST00000216366 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
AP4S1-201ENST00000216366 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
AP4S1-201ENST00000216366 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
AP4S1-201ENST00000216366 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
AP4S1-201ENST00000216366 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
AP4S1-201ENST00000216366 MT1LQ93083 61 aa3.9□□□□□ -1.79
AP4S1-201ENST00000216366 MT1EP04732 61 aa3.87□□□□□ -1.79
AP4S1-201ENST00000216366 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
AP4S1-201ENST00000216366 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
AP4S1-201ENST00000216366 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
AP4S1-201ENST00000216366 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
AP4S1-201ENST00000216366 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
AP4S1-201ENST00000216366 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
AP4S1-201ENST00000216366 MT1GP13640 62 aa3.63□□□□□ -1.83
AP4S1-201ENST00000216366 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
AP4S1-201ENST00000216366 MT1MQ8N339 61 aa3.6□□□□□ -1.83
AP4S1-201ENST00000216366 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
AP4S1-201ENST00000216366 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
AP4S1-201ENST00000216366 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
AP4S1-201ENST00000216366 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
AP4S1-201ENST00000216366 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
AP4S1-201ENST00000216366 MT1AP04731 61 aa3.36□□□□□ -1.87
AP4S1-201ENST00000216366 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
AP4S1-201ENST00000216366 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
AP4S1-201ENST00000216366 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
AP4S1-201ENST00000216366 NEBP20929 6669 aa3.31□□□□□ -1.88
AP4S1-201ENST00000216366 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
AP4S1-201ENST00000216366 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
AP4S1-201ENST00000216366 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
AP4S1-201ENST00000216366 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
AP4S1-201ENST00000216366 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
AP4S1-201ENST00000216366 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
AP4S1-201ENST00000216366 SPRR2EP22531 72 aa3.22□□□□□ -1.89
AP4S1-201ENST00000216366 SPRR2BP35325 72 aa3.22□□□□□ -1.89
AP4S1-201ENST00000216366 SPRR2AP35326 72 aa3.22□□□□□ -1.89
AP4S1-201ENST00000216366 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
AP4S1-201ENST00000216366 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
AP4S1-201ENST00000216366 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
AP4S1-201ENST00000216366 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
AP4S1-201ENST00000216366 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
AP4S1-201ENST00000216366 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
AP4S1-201ENST00000216366 PRM1P04553 51 aa3.13□□□□□ -1.91
AP4S1-201ENST00000216366 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
AP4S1-201ENST00000216366 SPRR2DP22532 72 aa3.1□□□□□ -1.91
AP4S1-201ENST00000216366 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
AP4S1-201ENST00000216366 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
AP4S1-201ENST00000216366 MT3P25713 68 aa2.91□□□□□ -1.94
AP4S1-201ENST00000216366 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
AP4S1-201ENST00000216366 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
AP4S1-201ENST00000216366 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
AP4S1-201ENST00000216366 MT4P47944 62 aa2.73□□□□□ -1.97
AP4S1-201ENST00000216366 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
AP4S1-201ENST00000216366 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
AP4S1-201ENST00000216366 LCE1FQ5T754 118 aa2.56□□□□□ -2
AP4S1-201ENST00000216366 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
AP4S1-201ENST00000216366 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
AP4S1-201ENST00000216366 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
AP4S1-201ENST00000216366 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
AP4S1-201ENST00000216366 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
AP4S1-201ENST00000216366 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
AP4S1-201ENST00000216366 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
AP4S1-201ENST00000216366 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
AP4S1-201ENST00000216366 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
AP4S1-201ENST00000216366 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
AP4S1-201ENST00000216366 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
AP4S1-201ENST00000216366 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
AP4S1-201ENST00000216366 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 132.1 ms