RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.81
RTCB-201ENST00000216038 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
RTCB-201ENST00000216038 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
RTCB-201ENST00000216038 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
RTCB-201ENST00000216038 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
RTCB-201ENST00000216038 MT1EP04732 61 aa3.64□□□□□ -1.83
RTCB-201ENST00000216038 SPRR2EP22531 72 aa3.57□□□□□ -1.84
RTCB-201ENST00000216038 SPRR2BP35325 72 aa3.57□□□□□ -1.84
RTCB-201ENST00000216038 SPRR2AP35326 72 aa3.57□□□□□ -1.84
RTCB-201ENST00000216038 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
RTCB-201ENST00000216038 NEBP20929 6669 aa3.54□□□□□ -1.84
RTCB-201ENST00000216038 MT1LQ93083 61 aa3.54□□□□□ -1.84
RTCB-201ENST00000216038 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
RTCB-201ENST00000216038 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
RTCB-201ENST00000216038 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
RTCB-201ENST00000216038 MT1GP13640 62 aa3.47□□□□□ -1.85
RTCB-201ENST00000216038 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
RTCB-201ENST00000216038 SPRR2DP22532 72 aa3.44□□□□□ -1.86
RTCB-201ENST00000216038 MT1MQ8N339 61 aa3.44□□□□□ -1.86
RTCB-201ENST00000216038 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
RTCB-201ENST00000216038 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
RTCB-201ENST00000216038 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
RTCB-201ENST00000216038 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
RTCB-201ENST00000216038 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
RTCB-201ENST00000216038 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
RTCB-201ENST00000216038 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
RTCB-201ENST00000216038 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
RTCB-201ENST00000216038 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
RTCB-201ENST00000216038 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
RTCB-201ENST00000216038 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
RTCB-201ENST00000216038 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
RTCB-201ENST00000216038 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
RTCB-201ENST00000216038 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
RTCB-201ENST00000216038 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
RTCB-201ENST00000216038 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
RTCB-201ENST00000216038 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
RTCB-201ENST00000216038 MT4P47944 62 aa3.03□□□□□ -1.92
RTCB-201ENST00000216038 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
RTCB-201ENST00000216038 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
RTCB-201ENST00000216038 KRTAP12-4P60329 112 aa3□□□□□ -1.93
RTCB-201ENST00000216038 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
RTCB-201ENST00000216038 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
RTCB-201ENST00000216038 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
RTCB-201ENST00000216038 MT1AP04731 61 aa2.99□□□□□ -1.93
RTCB-201ENST00000216038 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
RTCB-201ENST00000216038 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
RTCB-201ENST00000216038 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
RTCB-201ENST00000216038 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
RTCB-201ENST00000216038 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
RTCB-201ENST00000216038 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
RTCB-201ENST00000216038 MT3P25713 68 aa2.72□□□□□ -1.97
RTCB-201ENST00000216038 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
RTCB-201ENST00000216038 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
RTCB-201ENST00000216038 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
RTCB-201ENST00000216038 PRM1P04553 51 aa2.67□□□□□ -1.98
RTCB-201ENST00000216038 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
RTCB-201ENST00000216038 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
RTCB-201ENST00000216038 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
RTCB-201ENST00000216038 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
RTCB-201ENST00000216038 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
RTCB-201ENST00000216038 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
RTCB-201ENST00000216038 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
RTCB-201ENST00000216038 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
RTCB-201ENST00000216038 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
RTCB-201ENST00000216038 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
RTCB-201ENST00000216038 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
RTCB-201ENST00000216038 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
RTCB-201ENST00000216038 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
RTCB-201ENST00000216038 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
RTCB-201ENST00000216038 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
RTCB-201ENST00000216038 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
RTCB-201ENST00000216038 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
RTCB-201ENST00000216038 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
RTCB-201ENST00000216038 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
RTCB-201ENST00000216038 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
RTCB-201ENST00000216038 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
RTCB-201ENST00000216038 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 68.5 ms