RNA–Protein interactions for RNA: ENST00000215919.3

PATZ1-201, Transcript of POZ/BTB and AT hook containing zinc finger 1, humanhuman

TSL 1 (best) BASIC

Gene PATZ1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATZ1-201ENST00000215919 MT1LQ93083 61 aa6.97□□□□□ -1.29
PATZ1-201ENST00000215919 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.29
PATZ1-201ENST00000215919 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
PATZ1-201ENST00000215919 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
PATZ1-201ENST00000215919 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
PATZ1-201ENST00000215919 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
PATZ1-201ENST00000215919 KRTAP4-3Q9BYR4 195 aa6.58□□□□□ -1.36
PATZ1-201ENST00000215919 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
PATZ1-201ENST00000215919 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
PATZ1-201ENST00000215919 MT1GP13640 62 aa6.56□□□□□ -1.36
PATZ1-201ENST00000215919 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
PATZ1-201ENST00000215919 MT1MQ8N339 61 aa6.55□□□□□ -1.36
PATZ1-201ENST00000215919 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
PATZ1-201ENST00000215919 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
PATZ1-201ENST00000215919 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
PATZ1-201ENST00000215919 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
PATZ1-201ENST00000215919 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
PATZ1-201ENST00000215919 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
PATZ1-201ENST00000215919 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
PATZ1-201ENST00000215919 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
PATZ1-201ENST00000215919 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
PATZ1-201ENST00000215919 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
PATZ1-201ENST00000215919 SPRR2EP22531 72 aa6.08□□□□□ -1.44
PATZ1-201ENST00000215919 SPRR2BP35325 72 aa6.08□□□□□ -1.44
PATZ1-201ENST00000215919 SPRR2AP35326 72 aa6.08□□□□□ -1.44
PATZ1-201ENST00000215919 MDN1Q9NU22 5596 aa6.07□□□□□ -1.44
PATZ1-201ENST00000215919 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
PATZ1-201ENST00000215919 PRM1P04553 51 aa5.94□□□□□ -1.46
PATZ1-201ENST00000215919 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
PATZ1-201ENST00000215919 NEBP20929 6669 aa5.92□□□□□ -1.46
PATZ1-201ENST00000215919 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
PATZ1-201ENST00000215919 SPRR2DP22532 72 aa5.88□□□□□ -1.47
PATZ1-201ENST00000215919 MT1AP04731 61 aa5.86□□□□□ -1.47
PATZ1-201ENST00000215919 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
PATZ1-201ENST00000215919 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
PATZ1-201ENST00000215919 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
PATZ1-201ENST00000215919 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
PATZ1-201ENST00000215919 KRTAP2-2Q9BYT5 123 aa5.64□□□□□ -1.51
PATZ1-201ENST00000215919 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
PATZ1-201ENST00000215919 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.53
PATZ1-201ENST00000215919 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.53
PATZ1-201ENST00000215919 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
PATZ1-201ENST00000215919 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
PATZ1-201ENST00000215919 LCE1EQ5T753 118 aa5.34□□□□□ -1.56
PATZ1-201ENST00000215919 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
PATZ1-201ENST00000215919 MT3P25713 68 aa5.27□□□□□ -1.57
PATZ1-201ENST00000215919 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
PATZ1-201ENST00000215919 MT4P47944 62 aa5.03□□□□□ -1.6
PATZ1-201ENST00000215919 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
PATZ1-201ENST00000215919 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
PATZ1-201ENST00000215919 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
PATZ1-201ENST00000215919 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
PATZ1-201ENST00000215919 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
PATZ1-201ENST00000215919 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
PATZ1-201ENST00000215919 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
PATZ1-201ENST00000215919 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
PATZ1-201ENST00000215919 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
PATZ1-201ENST00000215919 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
PATZ1-201ENST00000215919 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
PATZ1-201ENST00000215919 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
PATZ1-201ENST00000215919 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
PATZ1-201ENST00000215919 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
PATZ1-201ENST00000215919 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
PATZ1-201ENST00000215919 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
PATZ1-201ENST00000215919 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
PATZ1-201ENST00000215919 MUC19Q7Z5P9 8384 aa3.98□□□□□ -1.77
PATZ1-201ENST00000215919 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
PATZ1-201ENST00000215919 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
PATZ1-201ENST00000215919 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
PATZ1-201ENST00000215919 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
PATZ1-201ENST00000215919 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
PATZ1-201ENST00000215919 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
PATZ1-201ENST00000215919 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
PATZ1-201ENST00000215919 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
PATZ1-201ENST00000215919 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
PATZ1-201ENST00000215919 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
PATZ1-201ENST00000215919 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms