RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 SPRR2BP35325 72 aa3.89□□□□□ -1.79
TTC17-201ENST00000039989 SPRR2AP35326 72 aa3.89□□□□□ -1.79
TTC17-201ENST00000039989 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
TTC17-201ENST00000039989 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
TTC17-201ENST00000039989 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
TTC17-201ENST00000039989 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
TTC17-201ENST00000039989 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
TTC17-201ENST00000039989 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
TTC17-201ENST00000039989 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
TTC17-201ENST00000039989 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
TTC17-201ENST00000039989 MT1GP13640 62 aa3.8□□□□□ -1.8
TTC17-201ENST00000039989 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.81
TTC17-201ENST00000039989 MT1EP04732 61 aa3.76□□□□□ -1.81
TTC17-201ENST00000039989 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
TTC17-201ENST00000039989 MT1LQ93083 61 aa3.73□□□□□ -1.81
TTC17-201ENST00000039989 SPRR2DP22532 72 aa3.72□□□□□ -1.81
TTC17-201ENST00000039989 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
TTC17-201ENST00000039989 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
TTC17-201ENST00000039989 MT1MQ8N339 61 aa3.6□□□□□ -1.83
TTC17-201ENST00000039989 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
TTC17-201ENST00000039989 LCE3BQ5TA77 95 aa3.59□□□□□ -1.84
TTC17-201ENST00000039989 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
TTC17-201ENST00000039989 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
TTC17-201ENST00000039989 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
TTC17-201ENST00000039989 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
TTC17-201ENST00000039989 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TTC17-201ENST00000039989 MT4P47944 62 aa3.44□□□□□ -1.86
TTC17-201ENST00000039989 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
TTC17-201ENST00000039989 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
TTC17-201ENST00000039989 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
TTC17-201ENST00000039989 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
TTC17-201ENST00000039989 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
TTC17-201ENST00000039989 INE1O15225 51 aa3.3□□□□□ -1.88
TTC17-201ENST00000039989 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
TTC17-201ENST00000039989 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
TTC17-201ENST00000039989 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
TTC17-201ENST00000039989 NEBP20929 6669 aa3.22□□□□□ -1.89
TTC17-201ENST00000039989 MT1AP04731 61 aa3.15□□□□□ -1.9
TTC17-201ENST00000039989 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
TTC17-201ENST00000039989 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.91
TTC17-201ENST00000039989 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.91
TTC17-201ENST00000039989 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
TTC17-201ENST00000039989 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
TTC17-201ENST00000039989 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
TTC17-201ENST00000039989 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
TTC17-201ENST00000039989 MT3P25713 68 aa3.08□□□□□ -1.92
TTC17-201ENST00000039989 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
TTC17-201ENST00000039989 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
TTC17-201ENST00000039989 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
TTC17-201ENST00000039989 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
TTC17-201ENST00000039989 PRM1P04553 51 aa2.79□□□□□ -1.96
TTC17-201ENST00000039989 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
TTC17-201ENST00000039989 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
TTC17-201ENST00000039989 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
TTC17-201ENST00000039989 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
TTC17-201ENST00000039989 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
TTC17-201ENST00000039989 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
TTC17-201ENST00000039989 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
TTC17-201ENST00000039989 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
TTC17-201ENST00000039989 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
TTC17-201ENST00000039989 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
TTC17-201ENST00000039989 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
TTC17-201ENST00000039989 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
TTC17-201ENST00000039989 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
TTC17-201ENST00000039989 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
TTC17-201ENST00000039989 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
TTC17-201ENST00000039989 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
TTC17-201ENST00000039989 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
TTC17-201ENST00000039989 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
TTC17-201ENST00000039989 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
TTC17-201ENST00000039989 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
TTC17-201ENST00000039989 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
TTC17-201ENST00000039989 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
TTC17-201ENST00000039989 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
TTC17-201ENST00000039989 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
TTC17-201ENST00000039989 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
TTC17-201ENST00000039989 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 138.9 ms