RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Prpf8Q99PV0 2335 aaKnown RBP8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm44501A8R0T9 150 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ccl1P10146 92 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Edn1P22387 202 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Rps28P62858 69 aaKnown RBP8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Tal2Q62282 108 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Taf15Q8BQ46 557 aaKnown RBP8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Mrpl32Q9DCI9 187 aaKnown RBP8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Qrich2A0A140LIY9 2337 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv9-4A0A0A6YWH6 117 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm17660B9UIU9 90 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 MgpP19788 104 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Igll1P20764 209 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gpr82Q8BZR0 328 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Fam19a5Q91WE9 132 aa8.89□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Olfr748E9Q9Z0 307 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm21913J3KML9 361 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm21776J3QPJ5 361 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Lynx1P0DP60 116 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Q497N7 227 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Jpt2Q6PGH2 190 aaKnown RBP8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 F930015N05RikQ8C3A3 210 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Klf13Q9JJZ6 289 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trav4-4-dv10A0A075B651 110 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm45521A0A1B0GRK0 198 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Fgf6P21658 208 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Duxbl2Q7TNE6 350 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm9913Q8BQQ2 135 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Higd1bQ99JY6 98 aa8.88□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv1-69A0A0G2JFS5 117 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 9230102O04RikA2ASX7 82 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Defa34D3Z0J0 93 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm21060J3KMU4 56 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Znf575Q3TXZ1 239 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Mettl26Q9DCS2 204 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv1-55A0A075B5W6 117 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv5-8A0A075B676 92 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv8-4A0A0A6YW26 117 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trbv1A0A0B4J1G7 116 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm5741B2RVA4 72 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Smim6Q3U0I6 56 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Fam24aQ8CF27 98 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Olfr958Q8VEY3 312 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Q9D8L0 127 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 EppinQ9DA01 134 aa8.87□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Abca2P41234 2434 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv5-6A0A075B5Q0 117 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trav6n-6A0A075B6B2 114 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Esp3J3QN49 87 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Rnase9P60154 184 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ube2g1P62254 170 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Cysrt1Q9D1E4 142 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Pla2g2eQ9QUL3 142 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Usp24B1AY13 2617 aaKnown RBP8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Hectd1Q69ZR2 2618 aaKnown RBP8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ighv1-15A0A0A6YXA5 117 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm20726G3UX18 150 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Crip1P63254 77 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Defa26Q3L180 93 aa8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Prss3Q792Z0 246 aaKnown RBP8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Nhp2Q9CRB2 153 aaKnown RBP8.86□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trav12-3A0A075B648 115 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm44596A0A0N4SVA0 210 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm14325A2AW67 498 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 P01736 120 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 S100a10P08207 97 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 NdpP48744 131 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Bsph2Q0Q236 131 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Olfr1419Q7TQS2 343 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Atp5g1Q9CR84 136 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Q9DAZ5 108 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 LystP97412 3788 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Utp20Q5XG71 2788 aaKnown RBP8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Ankrd11E9Q4F7 2643 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Muc4Q8JZM8 3443 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trav8-1A0A075B641 109 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trav21-dv12A0A075B6C4 109 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Rpl13aP19253 203 aaKnown RBP8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gsx1P31315 261 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Znf329Q6GQR8 522 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm12689Q8BQU9 117 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 MNCb-2875Q9DCB3 74 aa8.85□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Igkv1-133A0A0B4J1H8 120 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 CrxO54751 299 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Twist1P26687 206 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Lrcol1Q3URS3 161 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Trappc1Q5NCF2 145 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Slamf7Q8BHK6 333 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Rbfox2Q8BP71 449 aaKnown RBP8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm4763Q8CFJ5 196 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 PgpQ8CHP8 321 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Rasl10aQ8K5A4 203 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Sdk1Q3UH53 2193 aa8.84□□□□□ -0.99
Ddx55-201ENSMUST00000071057 Gm9733Q1AN91 178 aa8.84□□□□□ -1
Ddx55-201ENSMUST00000071057 Olfr996Q7TRA0 314 aa8.84□□□□□ -1
Ddx55-201ENSMUST00000071057 Olfr495Q8VF12 330 aa8.84□□□□□ -1
Ddx55-201ENSMUST00000071057 Trav6-6A0A075B603 114 aa8.83□□□□□ -1
Ddx55-201ENSMUST00000071057 Ighv5-16A0A0B4J1P4 117 aa8.83□□□□□ -1
Ddx55-201ENSMUST00000071057 Gm26965M0QWH4 86 aa8.83□□□□□ -1
Ddx55-201ENSMUST00000071057 P04944 107 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms