RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 KMT2CQ8NEZ4 4911 aaKnown RBP8.2□□□□□ -1.1
LINC02228-204ENST00000642115 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
LINC02228-204ENST00000642115 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
LINC02228-204ENST00000642115 DYNC1H1Q14204 4646 aaKnown RBP8.16□□□□□ -1.1
LINC02228-204ENST00000642115 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
LINC02228-204ENST00000642115 MYCBP2O75592 4640 aa8.09□□□□□ -1.11
LINC02228-204ENST00000642115 A0A0A0MQY5 61 aa8.06□□□□□ -1.12
LINC02228-204ENST00000642115 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
LINC02228-204ENST00000642115 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
LINC02228-204ENST00000642115 S4R3F8 94 aa8.02□□□□□ -1.13
LINC02228-204ENST00000642115 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
LINC02228-204ENST00000642115 RYR2Q92736 4967 aa8.01□□□□□ -1.13
LINC02228-204ENST00000642115 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
LINC02228-204ENST00000642115 PKHD1L1Q86WI1 4243 aa7.98□□□□□ -1.13
LINC02228-204ENST00000642115 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
LINC02228-204ENST00000642115 APOBP04114 4563 aaKnown RBP7.97□□□□□ -1.13
LINC02228-204ENST00000642115 HSPG2P98160 4391 aa7.97□□□□□ -1.13
LINC02228-204ENST00000642115 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
LINC02228-204ENST00000642115 RYR3Q15413 4870 aa7.92□□□□□ -1.14
LINC02228-204ENST00000642115 FAT3Q8TDW7 4589 aa7.87□□□□□ -1.15
LINC02228-204ENST00000642115 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
LINC02228-204ENST00000642115 XP32Q5T750 250 aa7.87□□□□□ -1.15
LINC02228-204ENST00000642115 A0A1B0GVY2 172 aa7.86□□□□□ -1.15
LINC02228-204ENST00000642115 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
LINC02228-204ENST00000642115 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.17
LINC02228-204ENST00000642115 TNXBP22105 4242 aa7.73□□□□□ -1.17
LINC02228-204ENST00000642115 LPAP08519 4548 aa7.73□□□□□ -1.17
LINC02228-204ENST00000642115 Q5VSD8 79 aa7.71□□□□□ -1.17
LINC02228-204ENST00000642115 EPPK1P58107 5090 aaKnown RBP7.67□□□□□ -1.18
LINC02228-204ENST00000642115 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
LINC02228-204ENST00000642115 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
LINC02228-204ENST00000642115 LRP2P98164 4655 aa7.63□□□□□ -1.19
LINC02228-204ENST00000642115 RYR1P21817 5038 aa7.61□□□□□ -1.19
LINC02228-204ENST00000642115 M0QZ58 72 aa7.56□□□□□ -1.2
LINC02228-204ENST00000642115 R4GN34 69 aa7.48□□□□□ -1.21
LINC02228-204ENST00000642115 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
LINC02228-204ENST00000642115 ABCA13Q86UQ4 5058 aa7.39□□□□□ -1.23
LINC02228-204ENST00000642115 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
LINC02228-204ENST00000642115 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
LINC02228-204ENST00000642115 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
LINC02228-204ENST00000642115 HERC2O95714 4834 aa7.19□□□□□ -1.26
LINC02228-204ENST00000642115 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
LINC02228-204ENST00000642115 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
LINC02228-204ENST00000642115 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
LINC02228-204ENST00000642115 MUC2Q02817 5179 aa7.07□□□□□ -1.28
LINC02228-204ENST00000642115 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
LINC02228-204ENST00000642115 J3QL48 77 aa7.02□□□□□ -1.29
LINC02228-204ENST00000642115 HERC1Q15751 4861 aa7□□□□□ -1.29
LINC02228-204ENST00000642115 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
LINC02228-204ENST00000642115 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
LINC02228-204ENST00000642115 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
LINC02228-204ENST00000642115 TNP1P09430 55 aa6.82□□□□□ -1.32
LINC02228-204ENST00000642115 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
LINC02228-204ENST00000642115 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
LINC02228-204ENST00000642115 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
LINC02228-204ENST00000642115 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
LINC02228-204ENST00000642115 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.33
LINC02228-204ENST00000642115 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
LINC02228-204ENST00000642115 HMCN2Q8NDA2 5059 aa6.67□□□□□ -1.34
LINC02228-204ENST00000642115 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
LINC02228-204ENST00000642115 INE1O15225 51 aa6.56□□□□□ -1.36
LINC02228-204ENST00000642115 M0R2T5 61 aa6.55□□□□□ -1.36
LINC02228-204ENST00000642115 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
LINC02228-204ENST00000642115 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
LINC02228-204ENST00000642115 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
LINC02228-204ENST00000642115 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
LINC02228-204ENST00000642115 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
LINC02228-204ENST00000642115 MT1FP04733 61 aa6.24□□□□□ -1.41
LINC02228-204ENST00000642115 MT1HP80294 61 aa6.21□□□□□ -1.41
LINC02228-204ENST00000642115 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
LINC02228-204ENST00000642115 MT2AP02795 61 aa6.2□□□□□ -1.42
LINC02228-204ENST00000642115 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
LINC02228-204ENST00000642115 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
LINC02228-204ENST00000642115 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
LINC02228-204ENST00000642115 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
LINC02228-204ENST00000642115 MT1XP80297 61 aa6.06□□□□□ -1.44
LINC02228-204ENST00000642115 MT1BP07438 61 aa6.03□□□□□ -1.44
LINC02228-204ENST00000642115 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
LINC02228-204ENST00000642115 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
LINC02228-204ENST00000642115 KMT2DO14686 5537 aa5.92□□□□□ -1.46
LINC02228-204ENST00000642115 USH2AO75445 5202 aa5.92□□□□□ -1.46
LINC02228-204ENST00000642115 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
LINC02228-204ENST00000642115 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
LINC02228-204ENST00000642115 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
LINC02228-204ENST00000642115 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
LINC02228-204ENST00000642115 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
LINC02228-204ENST00000642115 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
LINC02228-204ENST00000642115 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
LINC02228-204ENST00000642115 LCE2BO14633 110 aa5.61□□□□□ -1.51
LINC02228-204ENST00000642115 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
LINC02228-204ENST00000642115 LCE2AQ5TA79 106 aaPredicted RBP5.6□□□□□ -1.51
LINC02228-204ENST00000642115 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
LINC02228-204ENST00000642115 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
LINC02228-204ENST00000642115 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
LINC02228-204ENST00000642115 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
LINC02228-204ENST00000642115 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
LINC02228-204ENST00000642115 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
LINC02228-204ENST00000642115 MT1LQ93083 61 aa5.25□□□□□ -1.57
LINC02228-204ENST00000642115 MT1EP04732 61 aa5.2□□□□□ -1.58
LINC02228-204ENST00000642115 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms