RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
PHGDH-231ENST00000641939 MP68P56378 58 aa6.8□□□□□ -1.32
PHGDH-231ENST00000641939 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
PHGDH-231ENST00000641939 A8MUN3 132 aa6.78□□□□□ -1.32
PHGDH-231ENST00000641939 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
PHGDH-231ENST00000641939 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
PHGDH-231ENST00000641939 NDUFC1O43677 76 aa6.76□□□□□ -1.33
PHGDH-231ENST00000641939 SYNE2Q8WXH0 6885 aaKnown RBP6.76□□□□□ -1.33
PHGDH-231ENST00000641939 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
PHGDH-231ENST00000641939 Q5VV11 94 aa6.73□□□□□ -1.33
PHGDH-231ENST00000641939 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
PHGDH-231ENST00000641939 H3BPC8 53 aa6.72□□□□□ -1.33
PHGDH-231ENST00000641939 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
PHGDH-231ENST00000641939 MT1BP07438 61 aa6.71□□□□□ -1.34
PHGDH-231ENST00000641939 CRIPTQ9P021 101 aa6.7□□□□□ -1.34
PHGDH-231ENST00000641939 H0YAA0 97 aa6.69□□□□□ -1.34
PHGDH-231ENST00000641939 K7ERU9 68 aa6.63□□□□□ -1.35
PHGDH-231ENST00000641939 A6NN06 94 aa6.62□□□□□ -1.35
PHGDH-231ENST00000641939 MT-ATP8P03928 68 aa6.62□□□□□ -1.35
PHGDH-231ENST00000641939 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
PHGDH-231ENST00000641939 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
PHGDH-231ENST00000641939 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
PHGDH-231ENST00000641939 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
PHGDH-231ENST00000641939 SMIM20Q8N5G0 67 aa6.55□□□□□ -1.36
PHGDH-231ENST00000641939 TRAV7A0A075B6U4 112 aa6.54□□□□□ -1.36
PHGDH-231ENST00000641939 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
PHGDH-231ENST00000641939 P0C880 135 aa6.46□□□□□ -1.38
PHGDH-231ENST00000641939 ACYP2P14621 99 aa6.46□□□□□ -1.38
PHGDH-231ENST00000641939 R4GN34 69 aa6.45□□□□□ -1.38
PHGDH-231ENST00000641939 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
PHGDH-231ENST00000641939 SNURFQ9Y675 71 aa6.4□□□□□ -1.38
PHGDH-231ENST00000641939 M0QZ58 72 aa6.39□□□□□ -1.39
PHGDH-231ENST00000641939 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
PHGDH-231ENST00000641939 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
PHGDH-231ENST00000641939 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
PHGDH-231ENST00000641939 NEBP20929 6669 aa6.35□□□□□ -1.39
PHGDH-231ENST00000641939 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
PHGDH-231ENST00000641939 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
PHGDH-231ENST00000641939 MT1XP80297 61 aa6.31□□□□□ -1.4
PHGDH-231ENST00000641939 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
PHGDH-231ENST00000641939 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
PHGDH-231ENST00000641939 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
PHGDH-231ENST00000641939 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
PHGDH-231ENST00000641939 KMT2DO14686 5537 aa6.21□□□□□ -1.42
PHGDH-231ENST00000641939 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
PHGDH-231ENST00000641939 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
PHGDH-231ENST00000641939 COX7CP15954 63 aa6.15□□□□□ -1.42
PHGDH-231ENST00000641939 COA5Q86WW8 74 aa6.13□□□□□ -1.43
PHGDH-231ENST00000641939 MDN1Q9NU22 5596 aa6.1□□□□□ -1.43
PHGDH-231ENST00000641939 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
PHGDH-231ENST00000641939 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
PHGDH-231ENST00000641939 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
PHGDH-231ENST00000641939 H7BZZ5 65 aa6.04□□□□□ -1.44
PHGDH-231ENST00000641939 CYSTM1Q9H1C7 97 aa6.04□□□□□ -1.44
PHGDH-231ENST00000641939 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
PHGDH-231ENST00000641939 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
PHGDH-231ENST00000641939 SEC61GP60059 68 aa6.01□□□□□ -1.45
PHGDH-231ENST00000641939 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
PHGDH-231ENST00000641939 KRTAP10-12P60413 245 aa6□□□□□ -1.45
PHGDH-231ENST00000641939 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
PHGDH-231ENST00000641939 SPRR2EP22531 72 aa5.98□□□□□ -1.45
PHGDH-231ENST00000641939 SPRR2BP35325 72 aa5.98□□□□□ -1.45
PHGDH-231ENST00000641939 SPRR2AP35326 72 aa5.98□□□□□ -1.45
PHGDH-231ENST00000641939 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
PHGDH-231ENST00000641939 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
PHGDH-231ENST00000641939 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
PHGDH-231ENST00000641939 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
PHGDH-231ENST00000641939 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
PHGDH-231ENST00000641939 A0A1B0GU33 70 aa5.9□□□□□ -1.46
PHGDH-231ENST00000641939 A0A0D9SG42 100 aa5.89□□□□□ -1.47
PHGDH-231ENST00000641939 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
PHGDH-231ENST00000641939 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
PHGDH-231ENST00000641939 A0A1B0GU69 56 aa5.82□□□□□ -1.48
PHGDH-231ENST00000641939 SPINT4Q6UDR6 99 aa5.8□□□□□ -1.48
PHGDH-231ENST00000641939 SPRR2DP22532 72 aa5.78□□□□□ -1.48
PHGDH-231ENST00000641939 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
PHGDH-231ENST00000641939 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
PHGDH-231ENST00000641939 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
PHGDH-231ENST00000641939 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
PHGDH-231ENST00000641939 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
PHGDH-231ENST00000641939 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
PHGDH-231ENST00000641939 A8MU10 97 aa5.67□□□□□ -1.5
PHGDH-231ENST00000641939 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
PHGDH-231ENST00000641939 TMEM258P61165 79 aa5.63□□□□□ -1.51
PHGDH-231ENST00000641939 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
PHGDH-231ENST00000641939 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
PHGDH-231ENST00000641939 MT1EP04732 61 aa5.6□□□□□ -1.51
PHGDH-231ENST00000641939 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
PHGDH-231ENST00000641939 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
PHGDH-231ENST00000641939 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
PHGDH-231ENST00000641939 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
PHGDH-231ENST00000641939 TNP1P09430 55 aa5.49□□□□□ -1.53
PHGDH-231ENST00000641939 UQCR11O14957 56 aa5.48□□□□□ -1.53
PHGDH-231ENST00000641939 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.53
PHGDH-231ENST00000641939 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
PHGDH-231ENST00000641939 MT1GP13640 62 aa5.42□□□□□ -1.54
PHGDH-231ENST00000641939 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
PHGDH-231ENST00000641939 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
PHGDH-231ENST00000641939 MT1LQ93083 61 aa5.36□□□□□ -1.55
PHGDH-231ENST00000641939 V9GYY9 64 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms