RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	RYR2	Q92736	4967 aa		4.67	□□□□□ -1.66
RTTN-223	ENST00000640931	RYR1	P21817	5038 aa		4.65	□□□□□ -1.67
RTTN-223	ENST00000640931	LRP1B	Q9NZR2	4599 aa		4.65	□□□□□ -1.67
RTTN-223	ENST00000640931	C14orf177	Q52M58	125 aa		4.65	□□□□□ -1.67
RTTN-223	ENST00000640931	KRTAP9-8	Q9BYQ0	159 aa		4.64	□□□□□ -1.67
RTTN-223	ENST00000640931	KRTAP10-2	P60368	255 aa		4.63	□□□□□ -1.67
RTTN-223	ENST00000640931	LCE5A	Q5TCM9	118 aa		4.63	□□□□□ -1.67
RTTN-223	ENST00000640931	SPACA4	Q8TDM5	124 aa		4.63	□□□□□ -1.67
RTTN-223	ENST00000640931	MRPL34	Q9BQ48	92 aa	Known RBP	4.61	□□□□□ -1.67
RTTN-223	ENST00000640931	PKHD1	P08F94	4074 aa		4.61	□□□□□ -1.67
RTTN-223	ENST00000640931	ANAPC11	Q9NYG5	84 aa		4.61	□□□□□ -1.67
RTTN-223	ENST00000640931	SSBP3-AS1	Q7Z2R9	100 aa		4.58	□□□□□ -1.68
RTTN-223	ENST00000640931	KRTAP9-7	A8MTY7	169 aa		4.58	□□□□□ -1.68
RTTN-223	ENST00000640931		Q96NJ1	140 aa		4.58	□□□□□ -1.68
RTTN-223	ENST00000640931	DYNC1H1	Q14204	4646 aa	Known RBP	4.58	□□□□□ -1.68
RTTN-223	ENST00000640931	KRTAP13-3	Q3SY46	172 aa		4.57	□□□□□ -1.68
RTTN-223	ENST00000640931	KRTAP13-1	Q8IUC0	172 aa		4.57	□□□□□ -1.68
RTTN-223	ENST00000640931	PSORS1C2	Q9UIG4	136 aa		4.57	□□□□□ -1.68
RTTN-223	ENST00000640931	VPS13B	Q7Z7G8	4022 aa		4.57	□□□□□ -1.68
RTTN-223	ENST00000640931		A0A1B0GVX0	72 aa		4.55	□□□□□ -1.68
RTTN-223	ENST00000640931	KRTAP10-1	P60331	282 aa		4.55	□□□□□ -1.68
RTTN-223	ENST00000640931	SPRR1B	P22528	89 aa		4.54	□□□□□ -1.68
RTTN-223	ENST00000640931		H0YAA0	97 aa		4.53	□□□□□ -1.68
RTTN-223	ENST00000640931	CIRBP-AS1	Q8TBR5	109 aa		4.53	□□□□□ -1.68
RTTN-223	ENST00000640931	FAT1	Q14517	4588 aa		4.51	□□□□□ -1.69
RTTN-223	ENST00000640931	APOB	P04114	4563 aa	Known RBP	4.51	□□□□□ -1.69
RTTN-223	ENST00000640931	CRIPT	Q9P021	101 aa		4.51	□□□□□ -1.69
RTTN-223	ENST00000640931		Q6ZSA8	131 aa		4.49	□□□□□ -1.69
RTTN-223	ENST00000640931	KRTAP9-3	Q9BYQ3	159 aa		4.48	□□□□□ -1.69
RTTN-223	ENST00000640931	UBR4	Q5T4S7	5183 aa		4.46	□□□□□ -1.7
RTTN-223	ENST00000640931	IGKV2-30	P06310	120 aa		4.45	□□□□□ -1.7
RTTN-223	ENST00000640931	TPRXL	Q17RH7	258 aa		4.44	□□□□□ -1.7
RTTN-223	ENST00000640931		A0A1B0GU33	70 aa		4.43	□□□□□ -1.7
RTTN-223	ENST00000640931	SMR3B	P02814	79 aa	Predicted RBP	4.43	□□□□□ -1.7
RTTN-223	ENST00000640931	CAMK2N1	Q7Z7J9	78 aa		4.43	□□□□□ -1.7
RTTN-223	ENST00000640931	H1FX-AS1	Q4G0G2	97 aa		4.41	□□□□□ -1.7
RTTN-223	ENST00000640931	KRTAP13-2	Q52LG2	175 aa		4.41	□□□□□ -1.7
RTTN-223	ENST00000640931	IGKV2D-30	A0A075B6S6	120 aa		4.4	□□□□□ -1.71
RTTN-223	ENST00000640931		A0A1B0GVY2	172 aa		4.39	□□□□□ -1.71
RTTN-223	ENST00000640931	PKHD1L1	Q86WI1	4243 aa		4.38	□□□□□ -1.71
RTTN-223	ENST00000640931	SPINK6	Q6UWN8	80 aa		4.38	□□□□□ -1.71
RTTN-223	ENST00000640931	HSPG2	P98160	4391 aa		4.37	□□□□□ -1.71
RTTN-223	ENST00000640931	KRTAP1-4	P0C5Y4	121 aa		4.37	□□□□□ -1.71
RTTN-223	ENST00000640931	ABCA13	Q86UQ4	5058 aa		4.37	□□□□□ -1.71
RTTN-223	ENST00000640931	FLG2	Q5D862	2391 aa	Predicted RBP	4.36	□□□□□ -1.71
RTTN-223	ENST00000640931	KIAA1109	Q2LD37	5005 aa		4.36	□□□□□ -1.71
RTTN-223	ENST00000640931	LRP1	Q07954	4544 aa	Known RBP	4.32	□□□□□ -1.72
RTTN-223	ENST00000640931	COX6B2	Q6YFQ2	88 aa		4.31	□□□□□ -1.72
RTTN-223	ENST00000640931	SPINK1	P00995	79 aa		4.3	□□□□□ -1.72
RTTN-223	ENST00000640931	KRTAP10-4	P60372	401 aa	Predicted RBP	4.3	□□□□□ -1.72
RTTN-223	ENST00000640931	TNXB	P22105	4242 aa		4.3	□□□□□ -1.72
RTTN-223	ENST00000640931	RPL37	P61927	97 aa	Known RBP	4.28	□□□□□ -1.72
RTTN-223	ENST00000640931	HERC1	Q15751	4861 aa		4.28	□□□□□ -1.72
RTTN-223	ENST00000640931	TYMSOS	Q8TAI1	123 aa		4.28	□□□□□ -1.72
RTTN-223	ENST00000640931	C10orf95	Q9H7T3	257 aa		4.28	□□□□□ -1.72
RTTN-223	ENST00000640931	FAT3	Q8TDW7	4589 aa		4.26	□□□□□ -1.73
RTTN-223	ENST00000640931	MYCBP2	O75592	4640 aa		4.2	□□□□□ -1.74
RTTN-223	ENST00000640931	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.19	□□□□□ -1.74
RTTN-223	ENST00000640931	C9orf92	A6NGG3	77 aa		4.17	□□□□□ -1.74
RTTN-223	ENST00000640931		Q5VSD8	79 aa		4.17	□□□□□ -1.74
RTTN-223	ENST00000640931		Q8N1X5	172 aa		4.17	□□□□□ -1.74
RTTN-223	ENST00000640931	PLAC4	Q8WY50	150 aa		4.17	□□□□□ -1.74
RTTN-223	ENST00000640931	PRO2289	Q9P1D8	64 aa		4.15	□□□□□ -1.75
RTTN-223	ENST00000640931	KRTAP10-8	P60410	259 aa		4.09	□□□□□ -1.75
RTTN-223	ENST00000640931	LPA	P08519	4548 aa		4.08	□□□□□ -1.76
RTTN-223	ENST00000640931		S4R3F8	94 aa		4.07	□□□□□ -1.76
RTTN-223	ENST00000640931	RPS29	P62273	56 aa	Known RBP	4.06	□□□□□ -1.76
RTTN-223	ENST00000640931	MT1HL1	P0DM35	61 aa		4.05	□□□□□ -1.76
RTTN-223	ENST00000640931		A0A0D9SG42	100 aa		4.03	□□□□□ -1.76
RTTN-223	ENST00000640931	KRTAP13-4	Q3LI77	160 aa		4.01	□□□□□ -1.77
RTTN-223	ENST00000640931	LRP2	P98164	4655 aa		4	□□□□□ -1.77
RTTN-223	ENST00000640931	KRTAP3-1	Q9BYR8	98 aa		3.99	□□□□□ -1.77
RTTN-223	ENST00000640931	KRTAP10-6	P60371	365 aa	Predicted RBP	3.99	□□□□□ -1.77
RTTN-223	ENST00000640931	HMCN2	Q8NDA2	5059 aa		3.98	□□□□□ -1.77
RTTN-223	ENST00000640931		R4GN34	69 aa		3.97	□□□□□ -1.77
RTTN-223	ENST00000640931	KRTAP12-2	P59991	146 aa		3.96	□□□□□ -1.78
RTTN-223	ENST00000640931	INE1	O15225	51 aa		3.94	□□□□□ -1.78
RTTN-223	ENST00000640931	RNF213	Q63HN8	5207 aa		3.93	□□□□□ -1.78
RTTN-223	ENST00000640931	KRTAP12-1	P59990	96 aa		3.92	□□□□□ -1.78
RTTN-223	ENST00000640931	KRTAP23-1	A1A580	65 aa		3.89	□□□□□ -1.79
RTTN-223	ENST00000640931	MUC2	Q02817	5179 aa		3.88	□□□□□ -1.79
RTTN-223	ENST00000640931	CRCT1	Q9UGL9	99 aa		3.86	□□□□□ -1.79
RTTN-223	ENST00000640931	FAT4	Q6V0I7	4981 aa		3.86	□□□□□ -1.79
RTTN-223	ENST00000640931	MUC17	Q685J3	4493 aa		3.85	□□□□□ -1.79
RTTN-223	ENST00000640931	PP632	Q6XCG6	107 aa		3.83	□□□□□ -1.8
RTTN-223	ENST00000640931	KRTAP4-1	Q9BYQ7	146 aa		3.8	□□□□□ -1.8
RTTN-223	ENST00000640931	SPRR5	A0A1B0GTR4	108 aa		3.79	□□□□□ -1.8
RTTN-223	ENST00000640931		M0QZ58	72 aa		3.77	□□□□□ -1.81
RTTN-223	ENST00000640931	KRTAP19-2	Q3LHN2	52 aa		3.64	□□□□□ -1.83
RTTN-223	ENST00000640931	FLG	P20930	4061 aa	Predicted RBP	3.63	□□□□□ -1.83
RTTN-223	ENST00000640931	FSIP2	Q5CZC0	6907 aa		3.57	□□□□□ -1.84
RTTN-223	ENST00000640931	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.43	□□□□□ -1.86
RTTN-223	ENST00000640931	HMCN1	Q96RW7	5635 aa		3.42	□□□□□ -1.86
RTTN-223	ENST00000640931	MT1H	P80294	61 aa		3.41	□□□□□ -1.86
RTTN-223	ENST00000640931	SSPO	A2VEC9	5147 aa		3.4	□□□□□ -1.87
RTTN-223	ENST00000640931		M0R2T5	61 aa		3.37	□□□□□ -1.87
RTTN-223	ENST00000640931	TNP1	P09430	55 aa		3.36	□□□□□ -1.87
RTTN-223	ENST00000640931	MT1F	P04733	61 aa		3.32	□□□□□ -1.88
RTTN-223	ENST00000640931	MT2A	P02795	61 aa		3.31	□□□□□ -1.88
RTTN-223	ENST00000640931	KRTAP10-10	P60014	251 aa		3.28	□□□□□ -1.89

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