RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
PAX6-277ENST00000640735 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
PAX6-277ENST00000640735 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
PAX6-277ENST00000640735 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
PAX6-277ENST00000640735 SPINK7P58062 85 aa8.36□□□□□ -1.07
PAX6-277ENST00000640735 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
PAX6-277ENST00000640735 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
PAX6-277ENST00000640735 A8MUU9 505 aa8.3□□□□□ -1.08
PAX6-277ENST00000640735 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
PAX6-277ENST00000640735 ROMO1P60602 79 aa8.29□□□□□ -1.08
PAX6-277ENST00000640735 A0A1B0GU69 56 aa8.25□□□□□ -1.09
PAX6-277ENST00000640735 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
PAX6-277ENST00000640735 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
PAX6-277ENST00000640735 FAT3Q8TDW7 4589 aa8.21□□□□□ -1.1
PAX6-277ENST00000640735 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
PAX6-277ENST00000640735 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
PAX6-277ENST00000640735 SPATA8Q6RVD6 105 aa8.18□□□□□ -1.1
PAX6-277ENST00000640735 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
PAX6-277ENST00000640735 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
PAX6-277ENST00000640735 UQCR11O14957 56 aa8.11□□□□□ -1.11
PAX6-277ENST00000640735 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
PAX6-277ENST00000640735 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
PAX6-277ENST00000640735 TNXBP22105 4242 aa8.08□□□□□ -1.12
PAX6-277ENST00000640735 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
PAX6-277ENST00000640735 DMBT1Q9UGM3 2413 aaPredicted RBP7.96□□□□□ -1.14
PAX6-277ENST00000640735 NDUFAF8A1L188 74 aa7.96□□□□□ -1.14
PAX6-277ENST00000640735 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
PAX6-277ENST00000640735 P0C880 135 aa7.93□□□□□ -1.14
PAX6-277ENST00000640735 HERC1Q15751 4861 aa7.9□□□□□ -1.14
PAX6-277ENST00000640735 RPL37P61927 97 aaKnown RBP7.85□□□□□ -1.15
PAX6-277ENST00000640735 H0YAA0 97 aa7.85□□□□□ -1.15
PAX6-277ENST00000640735 A0A1B0GU33 70 aa7.83□□□□□ -1.16
PAX6-277ENST00000640735 H1FX-AS1Q4G0G2 97 aa7.83□□□□□ -1.16
PAX6-277ENST00000640735 XP32Q5T750 250 aa7.79□□□□□ -1.16
PAX6-277ENST00000640735 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
PAX6-277ENST00000640735 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
PAX6-277ENST00000640735 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
PAX6-277ENST00000640735 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
PAX6-277ENST00000640735 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
PAX6-277ENST00000640735 S4R3F8 94 aa7.63□□□□□ -1.19
PAX6-277ENST00000640735 LPAP08519 4548 aa7.62□□□□□ -1.19
PAX6-277ENST00000640735 TPRXLQ17RH7 258 aa7.62□□□□□ -1.19
PAX6-277ENST00000640735 LRP2P98164 4655 aa7.56□□□□□ -1.2
PAX6-277ENST00000640735 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.21
PAX6-277ENST00000640735 R4GN34 69 aa7.5□□□□□ -1.21
PAX6-277ENST00000640735 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
PAX6-277ENST00000640735 MUC17Q685J3 4493 aa7.4□□□□□ -1.23
PAX6-277ENST00000640735 A0A0D9SG42 100 aa7.37□□□□□ -1.23
PAX6-277ENST00000640735 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
PAX6-277ENST00000640735 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
PAX6-277ENST00000640735 RNF213Q63HN8 5207 aa7.32□□□□□ -1.24
PAX6-277ENST00000640735 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
PAX6-277ENST00000640735 M0QZ58 72 aa7.3□□□□□ -1.24
PAX6-277ENST00000640735 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
PAX6-277ENST00000640735 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
PAX6-277ENST00000640735 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
PAX6-277ENST00000640735 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
PAX6-277ENST00000640735 MUC2Q02817 5179 aa7.21□□□□□ -1.26
PAX6-277ENST00000640735 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
PAX6-277ENST00000640735 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
PAX6-277ENST00000640735 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.29
PAX6-277ENST00000640735 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
PAX6-277ENST00000640735 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
PAX6-277ENST00000640735 MT1HP80294 61 aa6.86□□□□□ -1.31
PAX6-277ENST00000640735 M0R2T5 61 aa6.78□□□□□ -1.32
PAX6-277ENST00000640735 KRTAP9-4Q9BYQ2 154 aa6.69□□□□□ -1.34
PAX6-277ENST00000640735 INE1O15225 51 aa6.62□□□□□ -1.35
PAX6-277ENST00000640735 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
PAX6-277ENST00000640735 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
PAX6-277ENST00000640735 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
PAX6-277ENST00000640735 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
PAX6-277ENST00000640735 MT2AP02795 61 aa6.5□□□□□ -1.37
PAX6-277ENST00000640735 TNP1P09430 55 aa6.46□□□□□ -1.37
PAX6-277ENST00000640735 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
PAX6-277ENST00000640735 MT1FP04733 61 aa6.45□□□□□ -1.38
PAX6-277ENST00000640735 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
PAX6-277ENST00000640735 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
PAX6-277ENST00000640735 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
PAX6-277ENST00000640735 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
PAX6-277ENST00000640735 KRTAP9-7A8MTY7 169 aa6.32□□□□□ -1.4
PAX6-277ENST00000640735 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
PAX6-277ENST00000640735 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
PAX6-277ENST00000640735 KRTAP2-2Q9BYT5 123 aa6.23□□□□□ -1.41
PAX6-277ENST00000640735 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
PAX6-277ENST00000640735 LCE4AQ5TA78 99 aa6.17□□□□□ -1.42
PAX6-277ENST00000640735 USH2AO75445 5202 aa6.16□□□□□ -1.42
PAX6-277ENST00000640735 MT1BP07438 61 aa6.14□□□□□ -1.43
PAX6-277ENST00000640735 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
PAX6-277ENST00000640735 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
PAX6-277ENST00000640735 LCE1FQ5T754 118 aa6.08□□□□□ -1.44
PAX6-277ENST00000640735 MT3P25713 68 aa6.08□□□□□ -1.44
PAX6-277ENST00000640735 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
PAX6-277ENST00000640735 MT1XP80297 61 aa6.07□□□□□ -1.44
PAX6-277ENST00000640735 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
PAX6-277ENST00000640735 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
PAX6-277ENST00000640735 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
PAX6-277ENST00000640735 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
PAX6-277ENST00000640735 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
PAX6-277ENST00000640735 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
PAX6-277ENST00000640735 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms