RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
SCARB2-222ENST00000640634 CASC2Q6XLA1 102 aa5.65□□□□□ -1.51
SCARB2-222ENST00000640634 ZCCHC13Q8WW36 166 aaKnown RBP5.65□□□□□ -1.51
SCARB2-222ENST00000640634 ROMO1P60602 79 aa5.64□□□□□ -1.51
SCARB2-222ENST00000640634 ATOX1O00244 68 aa5.63□□□□□ -1.51
SCARB2-222ENST00000640634 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
SCARB2-222ENST00000640634 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
SCARB2-222ENST00000640634 Q5W150 140 aa5.6□□□□□ -1.51
SCARB2-222ENST00000640634 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
SCARB2-222ENST00000640634 A0A087WVE0 104 aa5.57□□□□□ -1.52
SCARB2-222ENST00000640634 HRES1P13985 223 aa5.57□□□□□ -1.52
SCARB2-222ENST00000640634 SPINK7P58062 85 aa5.57□□□□□ -1.52
SCARB2-222ENST00000640634 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
SCARB2-222ENST00000640634 MT1HP80294 61 aa5.56□□□□□ -1.52
SCARB2-222ENST00000640634 ATP5EP2Q5VTU8 51 aa5.56□□□□□ -1.52
SCARB2-222ENST00000640634 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
SCARB2-222ENST00000640634 Q1T7F1 81 aa5.54□□□□□ -1.52
SCARB2-222ENST00000640634 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
SCARB2-222ENST00000640634 SERP2Q8N6R1 65 aa5.51□□□□□ -1.53
SCARB2-222ENST00000640634 A0A1B0GU33 70 aa5.49□□□□□ -1.53
SCARB2-222ENST00000640634 NDUFC1O43677 76 aa5.45□□□□□ -1.54
SCARB2-222ENST00000640634 SPTSSBQ8NFR3 76 aa5.45□□□□□ -1.54
SCARB2-222ENST00000640634 TP53AIP1Q9HCN2 124 aa5.44□□□□□ -1.54
SCARB2-222ENST00000640634 M0R2T5 61 aa5.43□□□□□ -1.54
SCARB2-222ENST00000640634 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
SCARB2-222ENST00000640634 TRAV22A0A0B4J277 110 aa5.4□□□□□ -1.54
SCARB2-222ENST00000640634 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.54
SCARB2-222ENST00000640634 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.55
SCARB2-222ENST00000640634 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
SCARB2-222ENST00000640634 H0Y9P7 68 aa5.37□□□□□ -1.55
SCARB2-222ENST00000640634 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
SCARB2-222ENST00000640634 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
SCARB2-222ENST00000640634 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
SCARB2-222ENST00000640634 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
SCARB2-222ENST00000640634 P0C880 135 aa5.32□□□□□ -1.56
SCARB2-222ENST00000640634 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
SCARB2-222ENST00000640634 LINC00208Q96KT6 92 aa5.31□□□□□ -1.56
SCARB2-222ENST00000640634 H7BZZ5 65 aa5.31□□□□□ -1.56
SCARB2-222ENST00000640634 KLKP1Q107X0 134 aa5.29□□□□□ -1.56
SCARB2-222ENST00000640634 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
SCARB2-222ENST00000640634 SPINT4Q6UDR6 99 aa5.27□□□□□ -1.57
SCARB2-222ENST00000640634 MT2AP02795 61 aa5.26□□□□□ -1.57
SCARB2-222ENST00000640634 MT1FP04733 61 aa5.23□□□□□ -1.57
SCARB2-222ENST00000640634 R4GN34 69 aa5.23□□□□□ -1.57
SCARB2-222ENST00000640634 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
SCARB2-222ENST00000640634 S4R3F8 94 aa5.2□□□□□ -1.58
SCARB2-222ENST00000640634 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
SCARB2-222ENST00000640634 Q5VV11 94 aa5.17□□□□□ -1.58
SCARB2-222ENST00000640634 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
SCARB2-222ENST00000640634 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
SCARB2-222ENST00000640634 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.58
SCARB2-222ENST00000640634 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
SCARB2-222ENST00000640634 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
SCARB2-222ENST00000640634 DMAC1Q96GE9 116 aa5.14□□□□□ -1.59
SCARB2-222ENST00000640634 C20orf197Q8N268 126 aa5.12□□□□□ -1.59
SCARB2-222ENST00000640634 USH2AO75445 5202 aa5.11□□□□□ -1.59
SCARB2-222ENST00000640634 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
SCARB2-222ENST00000640634 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.6
SCARB2-222ENST00000640634 A8MU10 97 aa5.08□□□□□ -1.6
SCARB2-222ENST00000640634 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
SCARB2-222ENST00000640634 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
SCARB2-222ENST00000640634 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
SCARB2-222ENST00000640634 ACYP2P14621 99 aa4.96□□□□□ -1.62
SCARB2-222ENST00000640634 H0YAA0 97 aa4.92□□□□□ -1.62
SCARB2-222ENST00000640634 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
SCARB2-222ENST00000640634 PRR15LQ9BU68 103 aa4.89□□□□□ -1.63
SCARB2-222ENST00000640634 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
SCARB2-222ENST00000640634 COA5Q86WW8 74 aa4.87□□□□□ -1.63
SCARB2-222ENST00000640634 MT1BP07438 61 aa4.86□□□□□ -1.63
SCARB2-222ENST00000640634 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
SCARB2-222ENST00000640634 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
SCARB2-222ENST00000640634 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
SCARB2-222ENST00000640634 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
SCARB2-222ENST00000640634 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
SCARB2-222ENST00000640634 M0QZ58 72 aa4.77□□□□□ -1.65
SCARB2-222ENST00000640634 UQCR11O14957 56 aa4.75□□□□□ -1.65
SCARB2-222ENST00000640634 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
SCARB2-222ENST00000640634 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
SCARB2-222ENST00000640634 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
SCARB2-222ENST00000640634 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
SCARB2-222ENST00000640634 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SCARB2-222ENST00000640634 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
SCARB2-222ENST00000640634 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
SCARB2-222ENST00000640634 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
SCARB2-222ENST00000640634 INE1O15225 51 aa4.64□□□□□ -1.67
SCARB2-222ENST00000640634 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
SCARB2-222ENST00000640634 MT3P25713 68 aa4.63□□□□□ -1.67
SCARB2-222ENST00000640634 MT1XP80297 61 aa4.6□□□□□ -1.67
SCARB2-222ENST00000640634 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
SCARB2-222ENST00000640634 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
SCARB2-222ENST00000640634 A0A1B0GU69 56 aa4.58□□□□□ -1.68
SCARB2-222ENST00000640634 A0A0D9SG42 100 aa4.55□□□□□ -1.68
SCARB2-222ENST00000640634 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
SCARB2-222ENST00000640634 KMT2DO14686 5537 aa4.5□□□□□ -1.69
SCARB2-222ENST00000640634 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
SCARB2-222ENST00000640634 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
SCARB2-222ENST00000640634 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
SCARB2-222ENST00000640634 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
SCARB2-222ENST00000640634 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
SCARB2-222ENST00000640634 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms