RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 A0A0D9SG42 100 aa7.64□□□□□ -1.19
SCARB2-221ENST00000640341 RYR2Q92736 4967 aa7.62□□□□□ -1.19
SCARB2-221ENST00000640341 HSPG2P98160 4391 aa7.61□□□□□ -1.19
SCARB2-221ENST00000640341 Q5VSD8 79 aa7.59□□□□□ -1.19
SCARB2-221ENST00000640341 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
SCARB2-221ENST00000640341 K7ERS5 55 aa7.59□□□□□ -1.19
SCARB2-221ENST00000640341 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
SCARB2-221ENST00000640341 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
SCARB2-221ENST00000640341 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
SCARB2-221ENST00000640341 XP32Q5T750 250 aa7.5□□□□□ -1.21
SCARB2-221ENST00000640341 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
SCARB2-221ENST00000640341 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
SCARB2-221ENST00000640341 S4R3F8 94 aa7.48□□□□□ -1.21
SCARB2-221ENST00000640341 TNXBP22105 4242 aa7.47□□□□□ -1.21
SCARB2-221ENST00000640341 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
SCARB2-221ENST00000640341 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.21
SCARB2-221ENST00000640341 LPAP08519 4548 aa7.44□□□□□ -1.22
SCARB2-221ENST00000640341 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
SCARB2-221ENST00000640341 P0C880 135 aa7.43□□□□□ -1.22
SCARB2-221ENST00000640341 ROMO1P60602 79 aa7.41□□□□□ -1.22
SCARB2-221ENST00000640341 KRTAP17-1Q9BYP8 105 aa7.39□□□□□ -1.23
SCARB2-221ENST00000640341 LRP2P98164 4655 aa7.38□□□□□ -1.23
SCARB2-221ENST00000640341 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
SCARB2-221ENST00000640341 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
SCARB2-221ENST00000640341 RYR1P21817 5038 aa7.35□□□□□ -1.23
SCARB2-221ENST00000640341 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
SCARB2-221ENST00000640341 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
SCARB2-221ENST00000640341 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
SCARB2-221ENST00000640341 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
SCARB2-221ENST00000640341 ABCA13Q86UQ4 5058 aa7.23□□□□□ -1.25
SCARB2-221ENST00000640341 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
SCARB2-221ENST00000640341 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
SCARB2-221ENST00000640341 J3QL48 77 aa7.1□□□□□ -1.27
SCARB2-221ENST00000640341 M0QZ58 72 aa7.09□□□□□ -1.27
SCARB2-221ENST00000640341 R4GN34 69 aa7.05□□□□□ -1.28
SCARB2-221ENST00000640341 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
SCARB2-221ENST00000640341 HERC2O95714 4834 aa7.03□□□□□ -1.28
SCARB2-221ENST00000640341 MUC2Q02817 5179 aa6.98□□□□□ -1.29
SCARB2-221ENST00000640341 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-221ENST00000640341 HERC1Q15751 4861 aa6.92□□□□□ -1.3
SCARB2-221ENST00000640341 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
SCARB2-221ENST00000640341 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.31
SCARB2-221ENST00000640341 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
SCARB2-221ENST00000640341 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
SCARB2-221ENST00000640341 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
SCARB2-221ENST00000640341 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
SCARB2-221ENST00000640341 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
SCARB2-221ENST00000640341 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
SCARB2-221ENST00000640341 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
SCARB2-221ENST00000640341 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
SCARB2-221ENST00000640341 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
SCARB2-221ENST00000640341 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
SCARB2-221ENST00000640341 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
SCARB2-221ENST00000640341 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-221ENST00000640341 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
SCARB2-221ENST00000640341 M0R2T5 61 aa6.43□□□□□ -1.38
SCARB2-221ENST00000640341 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
SCARB2-221ENST00000640341 TNP1P09430 55 aa6.37□□□□□ -1.39
SCARB2-221ENST00000640341 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
SCARB2-221ENST00000640341 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
SCARB2-221ENST00000640341 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
SCARB2-221ENST00000640341 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
SCARB2-221ENST00000640341 MT1HP80294 61 aa6.09□□□□□ -1.43
SCARB2-221ENST00000640341 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.44
SCARB2-221ENST00000640341 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
SCARB2-221ENST00000640341 MT1FP04733 61 aa6.06□□□□□ -1.44
SCARB2-221ENST00000640341 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
SCARB2-221ENST00000640341 MT2AP02795 61 aa6.02□□□□□ -1.45
SCARB2-221ENST00000640341 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SCARB2-221ENST00000640341 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
SCARB2-221ENST00000640341 USH2AO75445 5202 aa5.88□□□□□ -1.47
SCARB2-221ENST00000640341 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
SCARB2-221ENST00000640341 MT1BP07438 61 aa5.8□□□□□ -1.48
SCARB2-221ENST00000640341 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
SCARB2-221ENST00000640341 MT1XP80297 61 aa5.78□□□□□ -1.48
SCARB2-221ENST00000640341 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
SCARB2-221ENST00000640341 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
SCARB2-221ENST00000640341 KMT2DO14686 5537 aa5.75□□□□□ -1.49
SCARB2-221ENST00000640341 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
SCARB2-221ENST00000640341 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
SCARB2-221ENST00000640341 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
SCARB2-221ENST00000640341 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
SCARB2-221ENST00000640341 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
SCARB2-221ENST00000640341 LCE2BO14633 110 aa5.5□□□□□ -1.53
SCARB2-221ENST00000640341 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
SCARB2-221ENST00000640341 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
SCARB2-221ENST00000640341 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
SCARB2-221ENST00000640341 INE1O15225 51 aa5.4□□□□□ -1.54
SCARB2-221ENST00000640341 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
SCARB2-221ENST00000640341 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
SCARB2-221ENST00000640341 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
SCARB2-221ENST00000640341 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
SCARB2-221ENST00000640341 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
SCARB2-221ENST00000640341 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
SCARB2-221ENST00000640341 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
SCARB2-221ENST00000640341 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
SCARB2-221ENST00000640341 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
SCARB2-221ENST00000640341 MT1LQ93083 61 aa5□□□□□ -1.61
SCARB2-221ENST00000640341 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
SCARB2-221ENST00000640341 MT1EP04732 61 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms