RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 LYSTQ99698 3801 aa2.86□□□□□ -1.95
NECAP1-222ENST00000640072 TENM1Q9UKZ4 2725 aa2.83□□□□□ -1.96
NECAP1-222ENST00000640072 SMR3AQ99954 134 aa2.82□□□□□ -1.96
NECAP1-222ENST00000640072 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
NECAP1-222ENST00000640072 DNAH10Q8IVF4 4471 aa2.81□□□□□ -1.96
NECAP1-222ENST00000640072 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
NECAP1-222ENST00000640072 FRAS1Q86XX4 4008 aa2.78□□□□□ -1.96
NECAP1-222ENST00000640072 DNAH2Q9P225 4427 aa2.76□□□□□ -1.97
NECAP1-222ENST00000640072 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
NECAP1-222ENST00000640072 DNAH8Q96JB1 4490 aa2.75□□□□□ -1.97
NECAP1-222ENST00000640072 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
NECAP1-222ENST00000640072 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
NECAP1-222ENST00000640072 FBN3Q75N90 2809 aa2.74□□□□□ -1.97
NECAP1-222ENST00000640072 RPS29P62273 56 aaKnown RBP2.74□□□□□ -1.97
NECAP1-222ENST00000640072 PKHD1L1Q86WI1 4243 aa2.74□□□□□ -1.97
NECAP1-222ENST00000640072 TNP1P09430 55 aa2.72□□□□□ -1.97
NECAP1-222ENST00000640072 FAT2Q9NYQ8 4349 aa2.71□□□□□ -1.98
NECAP1-222ENST00000640072 Q5VSD8 79 aa2.7□□□□□ -1.98
NECAP1-222ENST00000640072 PLECQ15149 4684 aaKnown RBP2.69□□□□□ -1.98
NECAP1-222ENST00000640072 A0A1B0GVY2 172 aa2.68□□□□□ -1.98
NECAP1-222ENST00000640072 DNAH11Q96DT5 4516 aa2.68□□□□□ -1.98
NECAP1-222ENST00000640072 DNHD1Q96M86 4753 aa2.68□□□□□ -1.98
NECAP1-222ENST00000640072 PKD1P98161 4303 aa2.68□□□□□ -1.98
NECAP1-222ENST00000640072 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
NECAP1-222ENST00000640072 PKHD1P08F94 4074 aa2.66□□□□□ -1.98
NECAP1-222ENST00000640072 KRTAP10-2P60368 255 aa2.64□□□□□ -1.99
NECAP1-222ENST00000640072 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
NECAP1-222ENST00000640072 KMT2AQ03164 3969 aa2.61□□□□□ -1.99
NECAP1-222ENST00000640072 KRTAP17-1Q9BYP8 105 aa2.61□□□□□ -1.99
NECAP1-222ENST00000640072 DNAH5Q8TE73 4624 aa2.6□□□□□ -1.99
NECAP1-222ENST00000640072 VPS13BQ7Z7G8 4022 aa2.6□□□□□ -1.99
NECAP1-222ENST00000640072 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
NECAP1-222ENST00000640072 KRTAP4-8Q9BYQ9 185 aa2.59□□□□□ -1.99
NECAP1-222ENST00000640072 DYNC1H1Q14204 4646 aaKnown RBP2.59□□□□□ -1.99
NECAP1-222ENST00000640072 SMR3BP02814 79 aaPredicted RBP2.55□□□□□ -2
NECAP1-222ENST00000640072 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.55□□□□□ -2
NECAP1-222ENST00000640072 RYR2Q92736 4967 aa2.54□□□□□ -2
NECAP1-222ENST00000640072 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
NECAP1-222ENST00000640072 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
NECAP1-222ENST00000640072 KRTAP9-2Q9BYQ4 174 aa2.53□□□□□ -2
NECAP1-222ENST00000640072 HYDINQ4G0P3 5121 aa2.53□□□□□ -2
NECAP1-222ENST00000640072 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2.01
NECAP1-222ENST00000640072 KRTAP9-6A0A140TA67 174 aa2.52□□□□□ -2.01
NECAP1-222ENST00000640072 FAT3Q8TDW7 4589 aa2.51□□□□□ -2.01
NECAP1-222ENST00000640072 KRTAP9-8Q9BYQ0 159 aa2.51□□□□□ -2.01
NECAP1-222ENST00000640072 HSPG2P98160 4391 aa2.5□□□□□ -2.01
NECAP1-222ENST00000640072 LRP1BQ9NZR2 4599 aa2.5□□□□□ -2.01
NECAP1-222ENST00000640072 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
NECAP1-222ENST00000640072 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
NECAP1-222ENST00000640072 TNXBP22105 4242 aa2.49□□□□□ -2.01
NECAP1-222ENST00000640072 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
NECAP1-222ENST00000640072 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
NECAP1-222ENST00000640072 FAT1Q14517 4588 aa2.45□□□□□ -2.02
NECAP1-222ENST00000640072 KRTAP4-7Q9BYR0 210 aa2.45□□□□□ -2.02
NECAP1-222ENST00000640072 LCE3BQ5TA77 95 aa2.44□□□□□ -2.02
NECAP1-222ENST00000640072 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
NECAP1-222ENST00000640072 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
NECAP1-222ENST00000640072 KRTAP9-4Q9BYQ2 154 aa2.4□□□□□ -2.03
NECAP1-222ENST00000640072 KMT2CQ8NEZ4 4911 aaKnown RBP2.39□□□□□ -2.03
NECAP1-222ENST00000640072 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
NECAP1-222ENST00000640072 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
NECAP1-222ENST00000640072 RYR3Q15413 4870 aa2.39□□□□□ -2.03
NECAP1-222ENST00000640072 BIRC6Q9NR09 4857 aa2.39□□□□□ -2.03
NECAP1-222ENST00000640072 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
NECAP1-222ENST00000640072 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
NECAP1-222ENST00000640072 RYR1P21817 5038 aa2.36□□□□□ -2.03
NECAP1-222ENST00000640072 MYCBP2O75592 4640 aa2.34□□□□□ -2.03
NECAP1-222ENST00000640072 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.04
NECAP1-222ENST00000640072 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
NECAP1-222ENST00000640072 MUC17Q685J3 4493 aa2.33□□□□□ -2.04
NECAP1-222ENST00000640072 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
NECAP1-222ENST00000640072 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
NECAP1-222ENST00000640072 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
NECAP1-222ENST00000640072 HERC2O95714 4834 aa2.29□□□□□ -2.04
NECAP1-222ENST00000640072 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
NECAP1-222ENST00000640072 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
NECAP1-222ENST00000640072 M0R2T5 61 aa2.29□□□□□ -2.04
NECAP1-222ENST00000640072 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
NECAP1-222ENST00000640072 KRTAP4-9Q9BYQ8 210 aa2.27□□□□□ -2.05
NECAP1-222ENST00000640072 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
NECAP1-222ENST00000640072 EPPK1P58107 5090 aaKnown RBP2.25□□□□□ -2.05
NECAP1-222ENST00000640072 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
NECAP1-222ENST00000640072 KRTAP10-12P60413 245 aa2.23□□□□□ -2.05
NECAP1-222ENST00000640072 KRTAP19-1Q8IUB9 90 aa2.23□□□□□ -2.05
NECAP1-222ENST00000640072 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
NECAP1-222ENST00000640072 LCE4AQ5TA78 99 aa2.22□□□□□ -2.05
NECAP1-222ENST00000640072 LPAP08519 4548 aa2.22□□□□□ -2.05
NECAP1-222ENST00000640072 MT3P25713 68 aa2.2□□□□□ -2.06
NECAP1-222ENST00000640072 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
NECAP1-222ENST00000640072 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
NECAP1-222ENST00000640072 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
NECAP1-222ENST00000640072 KRTAP4-5Q9BYR2 181 aa2.16□□□□□ -2.06
NECAP1-222ENST00000640072 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
NECAP1-222ENST00000640072 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
NECAP1-222ENST00000640072 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
NECAP1-222ENST00000640072 LRP2P98164 4655 aa2.1□□□□□ -2.07
NECAP1-222ENST00000640072 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
NECAP1-222ENST00000640072 FLGP20930 4061 aaPredicted RBP2.1□□□□□ -2.07
NECAP1-222ENST00000640072 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
NECAP1-222ENST00000640072 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms