RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 A0A1B0GU69 56 aa6.06□□□□□ -1.44
PAX6-257ENST00000639409 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
PAX6-257ENST00000639409 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
PAX6-257ENST00000639409 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
PAX6-257ENST00000639409 HRES1P13985 223 aa6.05□□□□□ -1.44
PAX6-257ENST00000639409 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
PAX6-257ENST00000639409 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
PAX6-257ENST00000639409 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
PAX6-257ENST00000639409 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
PAX6-257ENST00000639409 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
PAX6-257ENST00000639409 Q5VSD8 79 aa6.02□□□□□ -1.45
PAX6-257ENST00000639409 Q8N1X5 172 aa5.99□□□□□ -1.45
PAX6-257ENST00000639409 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
PAX6-257ENST00000639409 ACYP2P14621 99 aa5.93□□□□□ -1.46
PAX6-257ENST00000639409 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
PAX6-257ENST00000639409 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.46
PAX6-257ENST00000639409 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
PAX6-257ENST00000639409 MT1HL1P0DM35 61 aa5.84□□□□□ -1.48
PAX6-257ENST00000639409 A0A1B0GU33 70 aa5.83□□□□□ -1.48
PAX6-257ENST00000639409 LPAP08519 4548 aa5.81□□□□□ -1.48
PAX6-257ENST00000639409 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
PAX6-257ENST00000639409 XP32Q5T750 250 aa5.77□□□□□ -1.49
PAX6-257ENST00000639409 LRP2P98164 4655 aa5.76□□□□□ -1.49
PAX6-257ENST00000639409 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
PAX6-257ENST00000639409 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
PAX6-257ENST00000639409 HERC2O95714 4834 aa5.68□□□□□ -1.5
PAX6-257ENST00000639409 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
PAX6-257ENST00000639409 CRIPTQ9P021 101 aa5.65□□□□□ -1.51
PAX6-257ENST00000639409 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
PAX6-257ENST00000639409 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
PAX6-257ENST00000639409 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
PAX6-257ENST00000639409 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
PAX6-257ENST00000639409 H0YAA0 97 aa5.55□□□□□ -1.52
PAX6-257ENST00000639409 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
PAX6-257ENST00000639409 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
PAX6-257ENST00000639409 S4R3F8 94 aa5.49□□□□□ -1.53
PAX6-257ENST00000639409 R4GN34 69 aa5.48□□□□□ -1.53
PAX6-257ENST00000639409 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
PAX6-257ENST00000639409 HERC1Q15751 4861 aa5.46□□□□□ -1.53
PAX6-257ENST00000639409 MUC2Q02817 5179 aa5.45□□□□□ -1.54
PAX6-257ENST00000639409 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
PAX6-257ENST00000639409 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
PAX6-257ENST00000639409 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
PAX6-257ENST00000639409 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
PAX6-257ENST00000639409 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
PAX6-257ENST00000639409 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
PAX6-257ENST00000639409 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
PAX6-257ENST00000639409 A0A0D9SG42 100 aa5.28□□□□□ -1.56
PAX6-257ENST00000639409 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
PAX6-257ENST00000639409 INE1O15225 51 aa5.24□□□□□ -1.57
PAX6-257ENST00000639409 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.58
PAX6-257ENST00000639409 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
PAX6-257ENST00000639409 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
PAX6-257ENST00000639409 KRTAP12-2P59991 146 aa5.17□□□□□ -1.58
PAX6-257ENST00000639409 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
PAX6-257ENST00000639409 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
PAX6-257ENST00000639409 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
PAX6-257ENST00000639409 M0QZ58 72 aa5.12□□□□□ -1.59
PAX6-257ENST00000639409 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
PAX6-257ENST00000639409 MT1HP80294 61 aa4.9□□□□□ -1.62
PAX6-257ENST00000639409 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
PAX6-257ENST00000639409 M0R2T5 61 aa4.86□□□□□ -1.63
PAX6-257ENST00000639409 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
PAX6-257ENST00000639409 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
PAX6-257ENST00000639409 MT1FP04733 61 aa4.78□□□□□ -1.64
PAX6-257ENST00000639409 MT2AP02795 61 aa4.77□□□□□ -1.65
PAX6-257ENST00000639409 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
PAX6-257ENST00000639409 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
PAX6-257ENST00000639409 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
PAX6-257ENST00000639409 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
PAX6-257ENST00000639409 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
PAX6-257ENST00000639409 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
PAX6-257ENST00000639409 TNP1P09430 55 aa4.57□□□□□ -1.68
PAX6-257ENST00000639409 MT1BP07438 61 aa4.56□□□□□ -1.68
PAX6-257ENST00000639409 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
PAX6-257ENST00000639409 USH2AO75445 5202 aa4.54□□□□□ -1.68
PAX6-257ENST00000639409 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
PAX6-257ENST00000639409 MT1XP80297 61 aa4.48□□□□□ -1.69
PAX6-257ENST00000639409 LCE2BO14633 110 aa4.44□□□□□ -1.7
PAX6-257ENST00000639409 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
PAX6-257ENST00000639409 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
PAX6-257ENST00000639409 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
PAX6-257ENST00000639409 KMT2DO14686 5537 aa4.33□□□□□ -1.72
PAX6-257ENST00000639409 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
PAX6-257ENST00000639409 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
PAX6-257ENST00000639409 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
PAX6-257ENST00000639409 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
PAX6-257ENST00000639409 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
PAX6-257ENST00000639409 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
PAX6-257ENST00000639409 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
PAX6-257ENST00000639409 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.75
PAX6-257ENST00000639409 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
PAX6-257ENST00000639409 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
PAX6-257ENST00000639409 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
PAX6-257ENST00000639409 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PAX6-257ENST00000639409 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
PAX6-257ENST00000639409 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
PAX6-257ENST00000639409 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
PAX6-257ENST00000639409 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
PAX6-257ENST00000639409 MT1EP04732 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms