RNA–Protein interactions for RNA: ENST00000638800.1

ZC3H11A-213, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 5

Gene ZC3H11A, Length 7,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-213ENST00000638800 ROMO1P60602 79 aa2.8□□□□□ -1.96
ZC3H11A-213ENST00000638800 VPS13BQ7Z7G8 4022 aa2.8□□□□□ -1.96
ZC3H11A-213ENST00000638800 DNHD1Q96M86 4753 aa2.79□□□□□ -1.96
ZC3H11A-213ENST00000638800 KRTAP4-5Q9BYR2 181 aa2.78□□□□□ -1.96
ZC3H11A-213ENST00000638800 KRTAP17-1Q9BYP8 105 aa2.77□□□□□ -1.97
ZC3H11A-213ENST00000638800 LRP1BQ9NZR2 4599 aa2.76□□□□□ -1.97
ZC3H11A-213ENST00000638800 DNAH5Q8TE73 4624 aa2.76□□□□□ -1.97
ZC3H11A-213ENST00000638800 H3BS24 57 aa2.76□□□□□ -1.97
ZC3H11A-213ENST00000638800 KRTAP3-1Q9BYR8 98 aa2.73□□□□□ -1.97
ZC3H11A-213ENST00000638800 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
ZC3H11A-213ENST00000638800 H0YAA0 97 aa2.72□□□□□ -1.97
ZC3H11A-213ENST00000638800 SACSQ9NZJ4 4579 aa2.72□□□□□ -1.97
ZC3H11A-213ENST00000638800 KRTAP25-1Q3LHN0 102 aa2.71□□□□□ -1.98
ZC3H11A-213ENST00000638800 P0C880 135 aa2.7□□□□□ -1.98
ZC3H11A-213ENST00000638800 PKD1P98161 4303 aa2.69□□□□□ -1.98
ZC3H11A-213ENST00000638800 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
ZC3H11A-213ENST00000638800 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
ZC3H11A-213ENST00000638800 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
ZC3H11A-213ENST00000638800 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.99
ZC3H11A-213ENST00000638800 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
ZC3H11A-213ENST00000638800 TNP1P09430 55 aa2.64□□□□□ -1.99
ZC3H11A-213ENST00000638800 FAT1Q14517 4588 aa2.64□□□□□ -1.99
ZC3H11A-213ENST00000638800 RYR3Q15413 4870 aa2.63□□□□□ -1.99
ZC3H11A-213ENST00000638800 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
ZC3H11A-213ENST00000638800 HSPG2P98160 4391 aa2.62□□□□□ -1.99
ZC3H11A-213ENST00000638800 HYDINQ4G0P3 5121 aa2.62□□□□□ -1.99
ZC3H11A-213ENST00000638800 KRTAP3-3Q9BYR6 98 aa2.6□□□□□ -1.99
ZC3H11A-213ENST00000638800 KRTAP10-6P60371 365 aaPredicted RBP2.59□□□□□ -1.99
ZC3H11A-213ENST00000638800 NDUFAF8A1L188 74 aa2.59□□□□□ -2
ZC3H11A-213ENST00000638800 PRO2289Q9P1D8 64 aa2.59□□□□□ -2
ZC3H11A-213ENST00000638800 KRTAP12-2P59991 146 aa2.58□□□□□ -2
ZC3H11A-213ENST00000638800 KRTAP12-1P59990 96 aa2.56□□□□□ -2
ZC3H11A-213ENST00000638800 PP632Q6XCG6 107 aa2.56□□□□□ -2
ZC3H11A-213ENST00000638800 TNXBP22105 4242 aa2.56□□□□□ -2
ZC3H11A-213ENST00000638800 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
ZC3H11A-213ENST00000638800 KRTAP3-2Q9BYR7 98 aa2.55□□□□□ -2
ZC3H11A-213ENST00000638800 RYR2Q92736 4967 aa2.54□□□□□ -2
ZC3H11A-213ENST00000638800 RYR1P21817 5038 aa2.52□□□□□ -2.01
ZC3H11A-213ENST00000638800 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
ZC3H11A-213ENST00000638800 KRTAP4-1Q9BYQ7 146 aa2.52□□□□□ -2.01
ZC3H11A-213ENST00000638800 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
ZC3H11A-213ENST00000638800 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
ZC3H11A-213ENST00000638800 MT1HP80294 61 aa2.43□□□□□ -2.02
ZC3H11A-213ENST00000638800 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
ZC3H11A-213ENST00000638800 LORP23490 312 aaPredicted RBP2.42□□□□□ -2.02
ZC3H11A-213ENST00000638800 LPAP08519 4548 aa2.41□□□□□ -2.02
ZC3H11A-213ENST00000638800 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
ZC3H11A-213ENST00000638800 HERC2O95714 4834 aa2.39□□□□□ -2.03
ZC3H11A-213ENST00000638800 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
ZC3H11A-213ENST00000638800 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
ZC3H11A-213ENST00000638800 MT2AP02795 61 aa2.35□□□□□ -2.03
ZC3H11A-213ENST00000638800 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
ZC3H11A-213ENST00000638800 BIRC6Q9NR09 4857 aa2.34□□□□□ -2.04
ZC3H11A-213ENST00000638800 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
ZC3H11A-213ENST00000638800 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
ZC3H11A-213ENST00000638800 MT1FP04733 61 aa2.32□□□□□ -2.04
ZC3H11A-213ENST00000638800 KRTAP15-1Q3LI76 137 aa2.31□□□□□ -2.04
ZC3H11A-213ENST00000638800 LRP2P98164 4655 aa2.31□□□□□ -2.04
ZC3H11A-213ENST00000638800 KRTAP23-1A1A580 65 aa2.3□□□□□ -2.04
ZC3H11A-213ENST00000638800 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
ZC3H11A-213ENST00000638800 LCE2CQ5TA81 110 aa2.27□□□□□ -2.05
ZC3H11A-213ENST00000638800 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
ZC3H11A-213ENST00000638800 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
ZC3H11A-213ENST00000638800 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
ZC3H11A-213ENST00000638800 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
ZC3H11A-213ENST00000638800 KRTAP9-8Q9BYQ0 159 aa2.23□□□□□ -2.05
ZC3H11A-213ENST00000638800 KRTAP19-1Q8IUB9 90 aa2.22□□□□□ -2.05
ZC3H11A-213ENST00000638800 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
ZC3H11A-213ENST00000638800 HERC1Q15751 4861 aa2.21□□□□□ -2.06
ZC3H11A-213ENST00000638800 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
ZC3H11A-213ENST00000638800 HMCN2Q8NDA2 5059 aa2.17□□□□□ -2.06
ZC3H11A-213ENST00000638800 KRTAP9-3Q9BYQ3 159 aa2.16□□□□□ -2.06
ZC3H11A-213ENST00000638800 MT1BP07438 61 aa2.15□□□□□ -2.07
ZC3H11A-213ENST00000638800 MT1XP80297 61 aa2.13□□□□□ -2.07
ZC3H11A-213ENST00000638800 KRTAP10-5P60370 271 aa2.12□□□□□ -2.07
ZC3H11A-213ENST00000638800 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
ZC3H11A-213ENST00000638800 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
ZC3H11A-213ENST00000638800 FAT4Q6V0I7 4981 aa2.09□□□□□ -2.07
ZC3H11A-213ENST00000638800 LCE2DQ5TA82 110 aaPredicted RBP2.09□□□□□ -2.08
ZC3H11A-213ENST00000638800 UBR4Q5T4S7 5183 aa2.09□□□□□ -2.08
ZC3H11A-213ENST00000638800 LCE2BO14633 110 aa2.07□□□□□ -2.08
ZC3H11A-213ENST00000638800 LCE2AQ5TA79 106 aaPredicted RBP2.07□□□□□ -2.08
ZC3H11A-213ENST00000638800 KRTAP9-6A0A140TA67 174 aa2.06□□□□□ -2.08
ZC3H11A-213ENST00000638800 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
ZC3H11A-213ENST00000638800 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
ZC3H11A-213ENST00000638800 KRTAP19-4Q3LI73 84 aa2.02□□□□□ -2.09
ZC3H11A-213ENST00000638800 KRTAP4-8A0A0G2JLE6 195 aa1.99□□□□□ -2.09
ZC3H11A-213ENST00000638800 KRTAP4-8Q9BYQ9 185 aa1.99□□□□□ -2.09
ZC3H11A-213ENST00000638800 MUC2Q02817 5179 aa1.98□□□□□ -2.09
ZC3H11A-213ENST00000638800 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
ZC3H11A-213ENST00000638800 INE1O15225 51 aa1.97□□□□□ -2.09
ZC3H11A-213ENST00000638800 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
ZC3H11A-213ENST00000638800 KRTAP9-2Q9BYQ4 174 aa1.96□□□□□ -2.1
ZC3H11A-213ENST00000638800 SPRR2EP22531 72 aa1.95□□□□□ -2.1
ZC3H11A-213ENST00000638800 SPRR2BP35325 72 aa1.95□□□□□ -2.1
ZC3H11A-213ENST00000638800 SPRR2AP35326 72 aa1.95□□□□□ -2.1
ZC3H11A-213ENST00000638800 MT1GP13640 62 aa1.9□□□□□ -2.11
ZC3H11A-213ENST00000638800 MT1EP04732 61 aa1.89□□□□□ -2.11
ZC3H11A-213ENST00000638800 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
ZC3H11A-213ENST00000638800 SPRR2DP22532 72 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms