RNA–Protein interactions for RNA: ENST00000638157.1

GRAMD1B-216, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-216ENST00000638157 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
GRAMD1B-216ENST00000638157 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
GRAMD1B-216ENST00000638157 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
GRAMD1B-216ENST00000638157 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
GRAMD1B-216ENST00000638157 RYR2Q92736 4967 aa6.76□□□□□ -1.33
GRAMD1B-216ENST00000638157 RYR3Q15413 4870 aa6.73□□□□□ -1.33
GRAMD1B-216ENST00000638157 DNAH6Q9C0G6 4158 aa6.73□□□□□ -1.33
GRAMD1B-216ENST00000638157 M0QZ58 72 aa6.73□□□□□ -1.33
GRAMD1B-216ENST00000638157 FRAS1Q86XX4 4008 aa6.72□□□□□ -1.33
GRAMD1B-216ENST00000638157 KRTAP10-8P60410 259 aa6.71□□□□□ -1.33
GRAMD1B-216ENST00000638157 PKHD1P08F94 4074 aa6.71□□□□□ -1.34
GRAMD1B-216ENST00000638157 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
GRAMD1B-216ENST00000638157 R4GN34 69 aa6.69□□□□□ -1.34
GRAMD1B-216ENST00000638157 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
GRAMD1B-216ENST00000638157 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
GRAMD1B-216ENST00000638157 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
GRAMD1B-216ENST00000638157 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
GRAMD1B-216ENST00000638157 DNAH8Q96JB1 4490 aa6.64□□□□□ -1.35
GRAMD1B-216ENST00000638157 HECTD4Q9Y4D8 3996 aa6.63□□□□□ -1.35
GRAMD1B-216ENST00000638157 RYR1P21817 5038 aa6.61□□□□□ -1.35
GRAMD1B-216ENST00000638157 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
GRAMD1B-216ENST00000638157 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
GRAMD1B-216ENST00000638157 VPS13BQ7Z7G8 4022 aa6.57□□□□□ -1.36
GRAMD1B-216ENST00000638157 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
GRAMD1B-216ENST00000638157 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
GRAMD1B-216ENST00000638157 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
GRAMD1B-216ENST00000638157 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
GRAMD1B-216ENST00000638157 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
GRAMD1B-216ENST00000638157 XP32Q5T750 250 aa6.5□□□□□ -1.37
GRAMD1B-216ENST00000638157 PKD1P98161 4303 aa6.48□□□□□ -1.37
GRAMD1B-216ENST00000638157 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
GRAMD1B-216ENST00000638157 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
GRAMD1B-216ENST00000638157 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
GRAMD1B-216ENST00000638157 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
GRAMD1B-216ENST00000638157 M0R2T5 61 aa6.39□□□□□ -1.39
GRAMD1B-216ENST00000638157 HERC2O95714 4834 aa6.39□□□□□ -1.39
GRAMD1B-216ENST00000638157 HSPG2P98160 4391 aa6.38□□□□□ -1.39
GRAMD1B-216ENST00000638157 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
GRAMD1B-216ENST00000638157 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
GRAMD1B-216ENST00000638157 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.42
GRAMD1B-216ENST00000638157 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
GRAMD1B-216ENST00000638157 LRP2P98164 4655 aa6.09□□□□□ -1.43
GRAMD1B-216ENST00000638157 TNP1P09430 55 aa6.09□□□□□ -1.44
GRAMD1B-216ENST00000638157 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
GRAMD1B-216ENST00000638157 HERC1Q15751 4861 aa6.01□□□□□ -1.45
GRAMD1B-216ENST00000638157 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
GRAMD1B-216ENST00000638157 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
GRAMD1B-216ENST00000638157 LPAP08519 4548 aa5.96□□□□□ -1.46
GRAMD1B-216ENST00000638157 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
GRAMD1B-216ENST00000638157 TNXBP22105 4242 aa5.92□□□□□ -1.46
GRAMD1B-216ENST00000638157 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
GRAMD1B-216ENST00000638157 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
GRAMD1B-216ENST00000638157 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
GRAMD1B-216ENST00000638157 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
GRAMD1B-216ENST00000638157 MUC2Q02817 5179 aa5.73□□□□□ -1.49
GRAMD1B-216ENST00000638157 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
GRAMD1B-216ENST00000638157 MT1HP80294 61 aa5.57□□□□□ -1.52
GRAMD1B-216ENST00000638157 INE1O15225 51 aa5.54□□□□□ -1.52
GRAMD1B-216ENST00000638157 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
GRAMD1B-216ENST00000638157 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
GRAMD1B-216ENST00000638157 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
GRAMD1B-216ENST00000638157 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
GRAMD1B-216ENST00000638157 MT2AP02795 61 aa5.38□□□□□ -1.55
GRAMD1B-216ENST00000638157 MT1FP04733 61 aa5.34□□□□□ -1.55
GRAMD1B-216ENST00000638157 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
GRAMD1B-216ENST00000638157 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
GRAMD1B-216ENST00000638157 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
GRAMD1B-216ENST00000638157 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
GRAMD1B-216ENST00000638157 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
GRAMD1B-216ENST00000638157 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
GRAMD1B-216ENST00000638157 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.57
GRAMD1B-216ENST00000638157 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
GRAMD1B-216ENST00000638157 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
GRAMD1B-216ENST00000638157 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
GRAMD1B-216ENST00000638157 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
GRAMD1B-216ENST00000638157 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
GRAMD1B-216ENST00000638157 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
GRAMD1B-216ENST00000638157 LCE2BO14633 110 aa4.97□□□□□ -1.61
GRAMD1B-216ENST00000638157 MT1BP07438 61 aa4.94□□□□□ -1.62
GRAMD1B-216ENST00000638157 KRTAP19-8Q3LI54 63 aa4.93□□□□□ -1.62
GRAMD1B-216ENST00000638157 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
GRAMD1B-216ENST00000638157 USH2AO75445 5202 aa4.91□□□□□ -1.62
GRAMD1B-216ENST00000638157 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
GRAMD1B-216ENST00000638157 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
GRAMD1B-216ENST00000638157 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
GRAMD1B-216ENST00000638157 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
GRAMD1B-216ENST00000638157 MT1XP80297 61 aa4.8□□□□□ -1.64
GRAMD1B-216ENST00000638157 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
GRAMD1B-216ENST00000638157 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
GRAMD1B-216ENST00000638157 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
GRAMD1B-216ENST00000638157 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
GRAMD1B-216ENST00000638157 KMT2DO14686 5537 aa4.71□□□□□ -1.65
GRAMD1B-216ENST00000638157 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
GRAMD1B-216ENST00000638157 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
GRAMD1B-216ENST00000638157 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
GRAMD1B-216ENST00000638157 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
GRAMD1B-216ENST00000638157 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
GRAMD1B-216ENST00000638157 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
GRAMD1B-216ENST00000638157 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
GRAMD1B-216ENST00000638157 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms