RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
CACNA1A-236ENST00000637117 NEBP20929 6669 aa4.5□□□□□ -1.69
CACNA1A-236ENST00000637117 A0A087WVE0 104 aa4.49□□□□□ -1.69
CACNA1A-236ENST00000637117 HRES1P13985 223 aa4.49□□□□□ -1.69
CACNA1A-236ENST00000637117 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
CACNA1A-236ENST00000637117 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
CACNA1A-236ENST00000637117 A0A1W2PNM2 257 aa4.48□□□□□ -1.69
CACNA1A-236ENST00000637117 NREPQ16612 68 aa4.47□□□□□ -1.69
CACNA1A-236ENST00000637117 NDUFC1O43677 76 aa4.45□□□□□ -1.7
CACNA1A-236ENST00000637117 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
CACNA1A-236ENST00000637117 LINC00313P59037 77 aa4.45□□□□□ -1.7
CACNA1A-236ENST00000637117 A0A087WSZ3 146 aa4.44□□□□□ -1.7
CACNA1A-236ENST00000637117 BPY2O14599 106 aa4.44□□□□□ -1.7
CACNA1A-236ENST00000637117 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
CACNA1A-236ENST00000637117 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
CACNA1A-236ENST00000637117 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
CACNA1A-236ENST00000637117 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
CACNA1A-236ENST00000637117 A8MWP4 228 aa4.39□□□□□ -1.71
CACNA1A-236ENST00000637117 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
CACNA1A-236ENST00000637117 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
CACNA1A-236ENST00000637117 Q8N9L7 120 aa4.37□□□□□ -1.71
CACNA1A-236ENST00000637117 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
CACNA1A-236ENST00000637117 K7EQZ3 153 aa4.35□□□□□ -1.71
CACNA1A-236ENST00000637117 LINC00472Q9H8W2 130 aa4.35□□□□□ -1.71
CACNA1A-236ENST00000637117 SPINK7P58062 85 aa4.34□□□□□ -1.71
CACNA1A-236ENST00000637117 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
CACNA1A-236ENST00000637117 C20orf197Q8N268 126 aa4.34□□□□□ -1.71
CACNA1A-236ENST00000637117 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.71
CACNA1A-236ENST00000637117 IGHV6-1A0A0B4J1U7 121 aa4.33□□□□□ -1.72
CACNA1A-236ENST00000637117 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
CACNA1A-236ENST00000637117 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CACNA1A-236ENST00000637117 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
CACNA1A-236ENST00000637117 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
CACNA1A-236ENST00000637117 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
CACNA1A-236ENST00000637117 H7BZZ5 65 aa4.3□□□□□ -1.72
CACNA1A-236ENST00000637117 C4orf26Q17RF5 130 aa4.3□□□□□ -1.72
CACNA1A-236ENST00000637117 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
CACNA1A-236ENST00000637117 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
CACNA1A-236ENST00000637117 NDUFB1O75438 58 aa4.27□□□□□ -1.73
CACNA1A-236ENST00000637117 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
CACNA1A-236ENST00000637117 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
CACNA1A-236ENST00000637117 SNURFQ9Y675 71 aa4.27□□□□□ -1.73
CACNA1A-236ENST00000637117 CASC2Q6XLA1 102 aa4.26□□□□□ -1.73
CACNA1A-236ENST00000637117 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
CACNA1A-236ENST00000637117 A6NN06 94 aa4.25□□□□□ -1.73
CACNA1A-236ENST00000637117 H3BPC8 53 aa4.25□□□□□ -1.73
CACNA1A-236ENST00000637117 V9GYY9 64 aa4.24□□□□□ -1.73
CACNA1A-236ENST00000637117 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
CACNA1A-236ENST00000637117 MP68P56378 58 aa4.22□□□□□ -1.73
CACNA1A-236ENST00000637117 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
CACNA1A-236ENST00000637117 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
CACNA1A-236ENST00000637117 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
CACNA1A-236ENST00000637117 H0Y9P7 68 aa4.19□□□□□ -1.74
CACNA1A-236ENST00000637117 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
CACNA1A-236ENST00000637117 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
CACNA1A-236ENST00000637117 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
CACNA1A-236ENST00000637117 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
CACNA1A-236ENST00000637117 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
CACNA1A-236ENST00000637117 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
CACNA1A-236ENST00000637117 MT1BP07438 61 aa4.17□□□□□ -1.74
CACNA1A-236ENST00000637117 Q1T7F1 81 aa4.17□□□□□ -1.74
CACNA1A-236ENST00000637117 MRPL34Q9BQ48 92 aaKnown RBP4.17□□□□□ -1.74
CACNA1A-236ENST00000637117 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
CACNA1A-236ENST00000637117 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
CACNA1A-236ENST00000637117 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
CACNA1A-236ENST00000637117 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
CACNA1A-236ENST00000637117 KMT2DO14686 5537 aa4.16□□□□□ -1.74
CACNA1A-236ENST00000637117 Q5VV11 94 aa4.15□□□□□ -1.75
CACNA1A-236ENST00000637117 LINC00208Q96KT6 92 aa4.15□□□□□ -1.75
CACNA1A-236ENST00000637117 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
CACNA1A-236ENST00000637117 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
CACNA1A-236ENST00000637117 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
CACNA1A-236ENST00000637117 LOC101927531A0A1B0GV80 90 aa4.11□□□□□ -1.75
CACNA1A-236ENST00000637117 A8MU10 97 aa4.11□□□□□ -1.75
CACNA1A-236ENST00000637117 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
CACNA1A-236ENST00000637117 NDUFS5O43920 106 aa4.1□□□□□ -1.75
CACNA1A-236ENST00000637117 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
CACNA1A-236ENST00000637117 Q5W150 140 aa4.05□□□□□ -1.76
CACNA1A-236ENST00000637117 C7orf65Q6ZTY9 151 aa4.04□□□□□ -1.76
CACNA1A-236ENST00000637117 SPRR2EP22531 72 aa4.02□□□□□ -1.77
CACNA1A-236ENST00000637117 SPRR2BP35325 72 aa4.02□□□□□ -1.77
CACNA1A-236ENST00000637117 SPRR2AP35326 72 aa4.02□□□□□ -1.77
CACNA1A-236ENST00000637117 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
CACNA1A-236ENST00000637117 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
CACNA1A-236ENST00000637117 COA5Q86WW8 74 aa4□□□□□ -1.77
CACNA1A-236ENST00000637117 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
CACNA1A-236ENST00000637117 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
CACNA1A-236ENST00000637117 S4R3F8 94 aa3.98□□□□□ -1.77
CACNA1A-236ENST00000637117 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
CACNA1A-236ENST00000637117 PSPHP1O15172 72 aa3.97□□□□□ -1.77
CACNA1A-236ENST00000637117 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
CACNA1A-236ENST00000637117 A8MUN3 132 aa3.95□□□□□ -1.78
CACNA1A-236ENST00000637117 ACYP2P14621 99 aa3.95□□□□□ -1.78
CACNA1A-236ENST00000637117 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
CACNA1A-236ENST00000637117 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CACNA1A-236ENST00000637117 LCA10Q71F78 164 aa3.95□□□□□ -1.78
CACNA1A-236ENST00000637117 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
CACNA1A-236ENST00000637117 A6NED7 52 aa3.93□□□□□ -1.78
CACNA1A-236ENST00000637117 PRR15LQ9BU68 103 aa3.93□□□□□ -1.78
CACNA1A-236ENST00000637117 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms