RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 LPAP08519 4548 aa10.06□□□□□ -0.8
CLN5-216ENST00000636780 KRTAP10-8P60410 259 aa10.02□□□□□ -0.8
CLN5-216ENST00000636780 ABCA13Q86UQ4 5058 aa9.93□□□□□ -0.82
CLN5-216ENST00000636780 LRP2P98164 4655 aa9.92□□□□□ -0.82
CLN5-216ENST00000636780 MIR22HGQ0VDD5 57 aa9.86□□□□□ -0.83
CLN5-216ENST00000636780 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
CLN5-216ENST00000636780 MT1HL1P0DM35 61 aa9.85□□□□□ -0.83
CLN5-216ENST00000636780 XP32Q5T750 250 aa9.84□□□□□ -0.83
CLN5-216ENST00000636780 UQCR11O14957 56 aa9.83□□□□□ -0.84
CLN5-216ENST00000636780 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
CLN5-216ENST00000636780 SPATA8Q6RVD6 105 aa9.8□□□□□ -0.84
CLN5-216ENST00000636780 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
CLN5-216ENST00000636780 RPL37P61927 97 aaKnown RBP9.76□□□□□ -0.85
CLN5-216ENST00000636780 H0YAA0 97 aa9.7□□□□□ -0.86
CLN5-216ENST00000636780 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.87
CLN5-216ENST00000636780 A0A1B0GU33 70 aa9.63□□□□□ -0.87
CLN5-216ENST00000636780 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
CLN5-216ENST00000636780 ROMO1P60602 79 aa9.53□□□□□ -0.88
CLN5-216ENST00000636780 S4R3F8 94 aa9.49□□□□□ -0.89
CLN5-216ENST00000636780 HERC2O95714 4834 aa9.49□□□□□ -0.89
CLN5-216ENST00000636780 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
CLN5-216ENST00000636780 MUC2Q02817 5179 aa9.48□□□□□ -0.89
CLN5-216ENST00000636780 KRTAP13-4Q3LI77 160 aa9.48□□□□□ -0.89
CLN5-216ENST00000636780 A0A0D9SG42 100 aa9.46□□□□□ -0.9
CLN5-216ENST00000636780 P0C880 135 aa9.45□□□□□ -0.9
CLN5-216ENST00000636780 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
CLN5-216ENST00000636780 KRTAP25-1Q3LHN0 102 aa9.42□□□□□ -0.9
CLN5-216ENST00000636780 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
CLN5-216ENST00000636780 CRIPTQ9P021 101 aa9.38□□□□□ -0.91
CLN5-216ENST00000636780 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
CLN5-216ENST00000636780 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
CLN5-216ENST00000636780 J3QL48 77 aa9.27□□□□□ -0.93
CLN5-216ENST00000636780 HERC1Q15751 4861 aa9.25□□□□□ -0.93
CLN5-216ENST00000636780 PCLOQ9Y6V0 5065 aa9.15□□□□□ -0.94
CLN5-216ENST00000636780 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
CLN5-216ENST00000636780 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
CLN5-216ENST00000636780 K7ERS5 55 aa9.09□□□□□ -0.95
CLN5-216ENST00000636780 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
CLN5-216ENST00000636780 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
CLN5-216ENST00000636780 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
CLN5-216ENST00000636780 A0A0A0MQY5 61 aa8.98□□□□□ -0.97
CLN5-216ENST00000636780 NDUFAF8A1L188 74 aa8.98□□□□□ -0.97
CLN5-216ENST00000636780 FAT4Q6V0I7 4981 aa8.98□□□□□ -0.97
CLN5-216ENST00000636780 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
CLN5-216ENST00000636780 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
CLN5-216ENST00000636780 M0QZ58 72 aa8.93□□□□□ -0.98
CLN5-216ENST00000636780 KRTAP19-2Q3LHN2 52 aa8.9□□□□□ -0.98
CLN5-216ENST00000636780 RNF213Q63HN8 5207 aa8.9□□□□□ -0.98
CLN5-216ENST00000636780 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
CLN5-216ENST00000636780 R4GN34 69 aa8.85□□□□□ -0.99
CLN5-216ENST00000636780 KRTAP15-1Q3LI76 137 aa8.82□□□□□ -1
CLN5-216ENST00000636780 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
CLN5-216ENST00000636780 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
CLN5-216ENST00000636780 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
CLN5-216ENST00000636780 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
CLN5-216ENST00000636780 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.06
CLN5-216ENST00000636780 M0R2T5 61 aa8.38□□□□□ -1.07
CLN5-216ENST00000636780 MT1HP80294 61 aa8.27□□□□□ -1.09
CLN5-216ENST00000636780 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
CLN5-216ENST00000636780 MT1FP04733 61 aa8.14□□□□□ -1.11
CLN5-216ENST00000636780 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
CLN5-216ENST00000636780 MT2AP02795 61 aa8.09□□□□□ -1.11
CLN5-216ENST00000636780 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
CLN5-216ENST00000636780 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
CLN5-216ENST00000636780 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
CLN5-216ENST00000636780 TNP1P09430 55 aa7.94□□□□□ -1.14
CLN5-216ENST00000636780 USH2AO75445 5202 aa7.91□□□□□ -1.14
CLN5-216ENST00000636780 PP632Q6XCG6 107 aa7.79□□□□□ -1.16
CLN5-216ENST00000636780 MT1BP07438 61 aa7.76□□□□□ -1.17
CLN5-216ENST00000636780 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
CLN5-216ENST00000636780 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
CLN5-216ENST00000636780 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
CLN5-216ENST00000636780 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
CLN5-216ENST00000636780 MT1XP80297 61 aa7.66□□□□□ -1.18
CLN5-216ENST00000636780 KMT2DO14686 5537 aa7.65□□□□□ -1.19
CLN5-216ENST00000636780 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
CLN5-216ENST00000636780 LCE2BO14633 110 aa7.53□□□□□ -1.2
CLN5-216ENST00000636780 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
CLN5-216ENST00000636780 KRTAP23-1A1A580 65 aa7.47□□□□□ -1.21
CLN5-216ENST00000636780 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
CLN5-216ENST00000636780 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
CLN5-216ENST00000636780 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
CLN5-216ENST00000636780 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
CLN5-216ENST00000636780 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
CLN5-216ENST00000636780 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
CLN5-216ENST00000636780 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
CLN5-216ENST00000636780 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
CLN5-216ENST00000636780 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
CLN5-216ENST00000636780 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
CLN5-216ENST00000636780 INE1O15225 51 aa6.96□□□□□ -1.29
CLN5-216ENST00000636780 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
CLN5-216ENST00000636780 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
CLN5-216ENST00000636780 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
CLN5-216ENST00000636780 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
CLN5-216ENST00000636780 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
CLN5-216ENST00000636780 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
CLN5-216ENST00000636780 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
CLN5-216ENST00000636780 MT1EP04732 61 aa6.6□□□□□ -1.35
CLN5-216ENST00000636780 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
CLN5-216ENST00000636780 MT1LQ93083 61 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms