RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ATOX1O00244 68 aa7.98□□□□□ -1.13
PNKP-225ENST00000636214 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
PNKP-225ENST00000636214 J3QR89 54 aa7.97□□□□□ -1.13
PNKP-225ENST00000636214 UQCRQO14949 82 aa7.97□□□□□ -1.13
PNKP-225ENST00000636214 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
PNKP-225ENST00000636214 FAM240AA0A1B0GVK7 77 aa7.96□□□□□ -1.14
PNKP-225ENST00000636214 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
PNKP-225ENST00000636214 H0Y9P7 68 aa7.95□□□□□ -1.14
PNKP-225ENST00000636214 NDUFC1O43677 76 aa7.94□□□□□ -1.14
PNKP-225ENST00000636214 A0A087WVE0 104 aa7.93□□□□□ -1.14
PNKP-225ENST00000636214 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
PNKP-225ENST00000636214 K7ERU9 68 aa7.87□□□□□ -1.15
PNKP-225ENST00000636214 A8MUN3 132 aa7.85□□□□□ -1.15
PNKP-225ENST00000636214 H0YAA0 97 aa7.83□□□□□ -1.16
PNKP-225ENST00000636214 NEBP20929 6669 aa7.83□□□□□ -1.16
PNKP-225ENST00000636214 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
PNKP-225ENST00000636214 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
PNKP-225ENST00000636214 MP68P56378 58 aa7.8□□□□□ -1.16
PNKP-225ENST00000636214 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
PNKP-225ENST00000636214 MUC12Q9UKN1 5478 aa7.79□□□□□ -1.16
PNKP-225ENST00000636214 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
PNKP-225ENST00000636214 OCR1Q9BZK8 76 aa7.68□□□□□ -1.18
PNKP-225ENST00000636214 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
PNKP-225ENST00000636214 C20orf197Q8N268 126 aa7.66□□□□□ -1.18
PNKP-225ENST00000636214 KRTAP5-9P26371 169 aa7.65□□□□□ -1.18
PNKP-225ENST00000636214 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
PNKP-225ENST00000636214 H3BPC8 53 aa7.64□□□□□ -1.19
PNKP-225ENST00000636214 R4GN34 69 aa7.64□□□□□ -1.19
PNKP-225ENST00000636214 KMT2DO14686 5537 aa7.62□□□□□ -1.19
PNKP-225ENST00000636214 SCGB1A1P11684 91 aa7.61□□□□□ -1.19
PNKP-225ENST00000636214 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
PNKP-225ENST00000636214 KRTAP20-1Q3LI63 56 aa7.6□□□□□ -1.19
PNKP-225ENST00000636214 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
PNKP-225ENST00000636214 M0QZ58 72 aa7.56□□□□□ -1.2
PNKP-225ENST00000636214 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
PNKP-225ENST00000636214 P0C880 135 aa7.52□□□□□ -1.21
PNKP-225ENST00000636214 MT1XP80297 61 aa7.51□□□□□ -1.21
PNKP-225ENST00000636214 SPRR2FQ96RM1 72 aa7.48□□□□□ -1.21
PNKP-225ENST00000636214 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
PNKP-225ENST00000636214 TRAV7A0A075B6U4 112 aa7.42□□□□□ -1.22
PNKP-225ENST00000636214 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
PNKP-225ENST00000636214 ACYP2P14621 99 aa7.4□□□□□ -1.22
PNKP-225ENST00000636214 SPRR2EP22531 72 aa7.4□□□□□ -1.22
PNKP-225ENST00000636214 SPRR2BP35325 72 aa7.4□□□□□ -1.22
PNKP-225ENST00000636214 SPRR2AP35326 72 aa7.4□□□□□ -1.22
PNKP-225ENST00000636214 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
PNKP-225ENST00000636214 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
PNKP-225ENST00000636214 SMIM20Q8N5G0 67 aa7.37□□□□□ -1.23
PNKP-225ENST00000636214 KRTAP2-3P0C7H8 128 aa7.35□□□□□ -1.23
PNKP-225ENST00000636214 KRTAP2-4Q9BYR9 128 aa7.35□□□□□ -1.23
PNKP-225ENST00000636214 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
PNKP-225ENST00000636214 SERP2Q8N6R1 65 aa7.25□□□□□ -1.25
PNKP-225ENST00000636214 LCE1AQ5T7P2 110 aa7.21□□□□□ -1.26
PNKP-225ENST00000636214 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
PNKP-225ENST00000636214 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
PNKP-225ENST00000636214 ANAPC13Q9BS18 74 aa7.19□□□□□ -1.26
PNKP-225ENST00000636214 SPRR2DP22532 72 aa7.17□□□□□ -1.26
PNKP-225ENST00000636214 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
PNKP-225ENST00000636214 COX7CP15954 63 aa7.16□□□□□ -1.26
PNKP-225ENST00000636214 SNURFQ9Y675 71 aa7.16□□□□□ -1.26
PNKP-225ENST00000636214 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
PNKP-225ENST00000636214 KRTAP2-2Q9BYT5 123 aa7.11□□□□□ -1.27
PNKP-225ENST00000636214 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
PNKP-225ENST00000636214 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
PNKP-225ENST00000636214 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
PNKP-225ENST00000636214 CCDC179H3BU77 68 aa6.99□□□□□ -1.29
PNKP-225ENST00000636214 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
PNKP-225ENST00000636214 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
PNKP-225ENST00000636214 SEC61GP60059 68 aa6.94□□□□□ -1.3
PNKP-225ENST00000636214 COA5Q86WW8 74 aa6.92□□□□□ -1.3
PNKP-225ENST00000636214 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
PNKP-225ENST00000636214 SERP1Q9Y6X1 66 aa6.92□□□□□ -1.3
PNKP-225ENST00000636214 H7BZZ5 65 aa6.91□□□□□ -1.3
PNKP-225ENST00000636214 A0A0D9SG42 100 aa6.84□□□□□ -1.31
PNKP-225ENST00000636214 PCP4P48539 62 aa6.84□□□□□ -1.31
PNKP-225ENST00000636214 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
PNKP-225ENST00000636214 TMEM258P61165 79 aa6.78□□□□□ -1.32
PNKP-225ENST00000636214 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
PNKP-225ENST00000636214 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
PNKP-225ENST00000636214 A0A1B0GU33 70 aa6.74□□□□□ -1.33
PNKP-225ENST00000636214 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
PNKP-225ENST00000636214 MT1EP04732 61 aa6.67□□□□□ -1.34
PNKP-225ENST00000636214 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
PNKP-225ENST00000636214 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
PNKP-225ENST00000636214 A0A1B0GU69 56 aa6.61□□□□□ -1.35
PNKP-225ENST00000636214 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
PNKP-225ENST00000636214 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
PNKP-225ENST00000636214 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
PNKP-225ENST00000636214 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
PNKP-225ENST00000636214 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
PNKP-225ENST00000636214 MT1GP13640 62 aa6.5□□□□□ -1.37
PNKP-225ENST00000636214 A8MU10 97 aa6.46□□□□□ -1.38
PNKP-225ENST00000636214 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
PNKP-225ENST00000636214 GPR98Q8WXG9 6306 aa6.44□□□□□ -1.38
PNKP-225ENST00000636214 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
PNKP-225ENST00000636214 TNP1P09430 55 aa6.42□□□□□ -1.38
PNKP-225ENST00000636214 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
PNKP-225ENST00000636214 MT1MQ8N339 61 aa6.37□□□□□ -1.39
PNKP-225ENST00000636214 MT1LQ93083 61 aa6.36□□□□□ -1.39
PNKP-225ENST00000636214 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms