RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
PATJ-216ENST00000635214 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
PATJ-216ENST00000635214 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
PATJ-216ENST00000635214 KRTAP10-10P60014 251 aa4.29□□□□□ -1.72
PATJ-216ENST00000635214 RYR2Q92736 4967 aa4.29□□□□□ -1.72
PATJ-216ENST00000635214 INE1O15225 51 aa4.27□□□□□ -1.73
PATJ-216ENST00000635214 VPS13CQ709C8 3753 aa4.26□□□□□ -1.73
PATJ-216ENST00000635214 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
PATJ-216ENST00000635214 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
PATJ-216ENST00000635214 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
PATJ-216ENST00000635214 CUBNO60494 3623 aa4.2□□□□□ -1.74
PATJ-216ENST00000635214 STARD9Q9P2P6 4700 aa4.2□□□□□ -1.74
PATJ-216ENST00000635214 SACSQ9NZJ4 4579 aa4.19□□□□□ -1.74
PATJ-216ENST00000635214 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
PATJ-216ENST00000635214 DNAH2Q9P225 4427 aa4.15□□□□□ -1.75
PATJ-216ENST00000635214 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
PATJ-216ENST00000635214 FAT2Q9NYQ8 4349 aa4.13□□□□□ -1.75
PATJ-216ENST00000635214 KRTAP17-1Q9BYP8 105 aa4.13□□□□□ -1.75
PATJ-216ENST00000635214 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
PATJ-216ENST00000635214 HERC2O95714 4834 aa4.09□□□□□ -1.75
PATJ-216ENST00000635214 DNAH8Q96JB1 4490 aa4.09□□□□□ -1.76
PATJ-216ENST00000635214 RYR1P21817 5038 aa4.08□□□□□ -1.76
PATJ-216ENST00000635214 COL7A1Q02388 2944 aa4.06□□□□□ -1.76
PATJ-216ENST00000635214 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
PATJ-216ENST00000635214 RYR3Q15413 4870 aa4□□□□□ -1.77
PATJ-216ENST00000635214 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
PATJ-216ENST00000635214 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
PATJ-216ENST00000635214 KMT2AQ03164 3969 aa3.98□□□□□ -1.77
PATJ-216ENST00000635214 HECTD4Q9Y4D8 3996 aa3.97□□□□□ -1.77
PATJ-216ENST00000635214 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
PATJ-216ENST00000635214 LYSTQ99698 3801 aa3.95□□□□□ -1.78
PATJ-216ENST00000635214 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
PATJ-216ENST00000635214 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
PATJ-216ENST00000635214 KRTAP3-3Q9BYR6 98 aa3.93□□□□□ -1.78
PATJ-216ENST00000635214 PKHD1P08F94 4074 aa3.92□□□□□ -1.78
PATJ-216ENST00000635214 HSPG2P98160 4391 aa3.92□□□□□ -1.78
PATJ-216ENST00000635214 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
PATJ-216ENST00000635214 HYDINQ4G0P3 5121 aa3.89□□□□□ -1.79
PATJ-216ENST00000635214 PKD1P98161 4303 aa3.89□□□□□ -1.79
PATJ-216ENST00000635214 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
PATJ-216ENST00000635214 SRRM2Q9UQ35 2752 aaKnown RBP3.88□□□□□ -1.79
PATJ-216ENST00000635214 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
PATJ-216ENST00000635214 CSMD3Q7Z407 3707 aa3.86□□□□□ -1.79
PATJ-216ENST00000635214 EPPK1P58107 5090 aaKnown RBP3.85□□□□□ -1.79
PATJ-216ENST00000635214 FAT1Q14517 4588 aa3.85□□□□□ -1.79
PATJ-216ENST00000635214 PCLOQ9Y6V0 5065 aa3.83□□□□□ -1.8
PATJ-216ENST00000635214 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
PATJ-216ENST00000635214 HERC1Q15751 4861 aa3.81□□□□□ -1.8
PATJ-216ENST00000635214 MYCBP2O75592 4640 aa3.75□□□□□ -1.81
PATJ-216ENST00000635214 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
PATJ-216ENST00000635214 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
PATJ-216ENST00000635214 MT1HP80294 61 aa3.71□□□□□ -1.82
PATJ-216ENST00000635214 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
PATJ-216ENST00000635214 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
PATJ-216ENST00000635214 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
PATJ-216ENST00000635214 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
PATJ-216ENST00000635214 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
PATJ-216ENST00000635214 LCE2AQ5TA79 106 aaPredicted RBP3.6□□□□□ -1.83
PATJ-216ENST00000635214 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.83
PATJ-216ENST00000635214 KRTAP10-5P60370 271 aa3.59□□□□□ -1.84
PATJ-216ENST00000635214 TNXBP22105 4242 aa3.59□□□□□ -1.84
PATJ-216ENST00000635214 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
PATJ-216ENST00000635214 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
PATJ-216ENST00000635214 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
PATJ-216ENST00000635214 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
PATJ-216ENST00000635214 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
PATJ-216ENST00000635214 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
PATJ-216ENST00000635214 MT2AP02795 61 aa3.5□□□□□ -1.85
PATJ-216ENST00000635214 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
PATJ-216ENST00000635214 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
PATJ-216ENST00000635214 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
PATJ-216ENST00000635214 MT1FP04733 61 aa3.39□□□□□ -1.87
PATJ-216ENST00000635214 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
PATJ-216ENST00000635214 KRTAP19-8Q3LI54 63 aa3.37□□□□□ -1.87
PATJ-216ENST00000635214 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
PATJ-216ENST00000635214 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
PATJ-216ENST00000635214 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
PATJ-216ENST00000635214 KRTAP19-6Q3LI70 58 aa3.31□□□□□ -1.88
PATJ-216ENST00000635214 LRP2P98164 4655 aa3.28□□□□□ -1.88
PATJ-216ENST00000635214 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
PATJ-216ENST00000635214 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
PATJ-216ENST00000635214 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
PATJ-216ENST00000635214 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
PATJ-216ENST00000635214 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
PATJ-216ENST00000635214 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
PATJ-216ENST00000635214 LPAP08519 4548 aa3.19□□□□□ -1.9
PATJ-216ENST00000635214 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
PATJ-216ENST00000635214 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
PATJ-216ENST00000635214 LCE2BO14633 110 aa3.18□□□□□ -1.9
PATJ-216ENST00000635214 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
PATJ-216ENST00000635214 UBR4Q5T4S7 5183 aa3.14□□□□□ -1.91
PATJ-216ENST00000635214 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
PATJ-216ENST00000635214 MT1BP07438 61 aa3.13□□□□□ -1.91
PATJ-216ENST00000635214 MT1XP80297 61 aa3.13□□□□□ -1.91
PATJ-216ENST00000635214 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
PATJ-216ENST00000635214 SPRR2EP22531 72 aa3.04□□□□□ -1.92
PATJ-216ENST00000635214 SPRR2BP35325 72 aa3.04□□□□□ -1.92
PATJ-216ENST00000635214 SPRR2AP35326 72 aa3.04□□□□□ -1.92
PATJ-216ENST00000635214 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
PATJ-216ENST00000635214 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms