RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-208ENST00000628734 USP9YO00507 2555 aaPredicted RBP1.46□□□□□ -2.18
UBE2A-208ENST00000628734 PDZD2O15018 2839 aa1.45□□□□□ -2.18
UBE2A-208ENST00000628734 FLNCQ14315 2725 aa1.45□□□□□ -2.18
UBE2A-208ENST00000628734 ITPR2Q14571 2701 aa1.45□□□□□ -2.18
UBE2A-208ENST00000628734 CSMD2Q7Z408 3487 aa1.45□□□□□ -2.18
UBE2A-208ENST00000628734 ATRQ13535 2644 aa1.44□□□□□ -2.18
UBE2A-208ENST00000628734 CENPEQ02224 2701 aa1.44□□□□□ -2.18
UBE2A-208ENST00000628734 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
UBE2A-208ENST00000628734 ANKHD1Q8IWZ3 2542 aaKnown RBP1.44□□□□□ -2.18
UBE2A-208ENST00000628734 CRYBG3Q68DQ2 2970 aa1.44□□□□□ -2.18
UBE2A-208ENST00000628734 PRRC2CQ9Y520 2896 aaKnown RBP1.43□□□□□ -2.18
UBE2A-208ENST00000628734 STAB1Q9NY15 2570 aa1.43□□□□□ -2.18
UBE2A-208ENST00000628734 NIPBLQ6KC79 2804 aaeCLIP1.43□□□□□ -2.18
UBE2A-208ENST00000628734 LINC01556Q5JQF7 62 aa1.43□□□□□ -2.18
UBE2A-208ENST00000628734 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
UBE2A-208ENST00000628734 AKAP9Q99996 3911 aa1.42□□□□□ -2.18
UBE2A-208ENST00000628734 BSNQ9UPA5 3926 aa1.42□□□□□ -2.18
UBE2A-208ENST00000628734 NOTCH1P46531 2555 aa1.42□□□□□ -2.18
UBE2A-208ENST00000628734 SRRM2Q9UQ35 2752 aaKnown RBP1.42□□□□□ -2.18
UBE2A-208ENST00000628734 COL6A5A8TX70 2615 aa1.41□□□□□ -2.18
UBE2A-208ENST00000628734 HIVEP1P15822 2718 aa1.41□□□□□ -2.18
UBE2A-208ENST00000628734 H3BNG1 76 aa1.41□□□□□ -2.18
UBE2A-208ENST00000628734 U3KQA8 63 aa1.41□□□□□ -2.18
UBE2A-208ENST00000628734 HIVEP3Q5T1R4 2406 aa1.41□□□□□ -2.18
UBE2A-208ENST00000628734 NBASA2RRP1 2371 aa1.41□□□□□ -2.18
UBE2A-208ENST00000628734 RP1L1Q8IWN7 2480 aaPredicted RBP1.4□□□□□ -2.19
UBE2A-208ENST00000628734 CUBNO60494 3623 aa1.4□□□□□ -2.19
UBE2A-208ENST00000628734 VPS13DQ5THJ4 4388 aa1.39□□□□□ -2.19
UBE2A-208ENST00000628734 FLNAP21333 2647 aaKnown RBP1.39□□□□□ -2.19
UBE2A-208ENST00000628734 APCP25054 2843 aa1.39□□□□□ -2.19
UBE2A-208ENST00000628734 PKD1L1Q8TDX9 2849 aa1.39□□□□□ -2.19
UBE2A-208ENST00000628734 SPART-AS1P0CW21 52 aa1.38□□□□□ -2.19
UBE2A-208ENST00000628734 HTN3P15516 51 aa1.38□□□□□ -2.19
UBE2A-208ENST00000628734 RYR3Q15413 4870 aa1.38□□□□□ -2.19
UBE2A-208ENST00000628734 NBEAL2Q6ZNJ1 2754 aa1.37□□□□□ -2.19
UBE2A-208ENST00000628734 TLN2Q9Y4G6 2542 aa1.37□□□□□ -2.19
UBE2A-208ENST00000628734 BIRC6Q9NR09 4857 aa1.37□□□□□ -2.19
UBE2A-208ENST00000628734 KMT2CQ8NEZ4 4911 aaKnown RBP1.36□□□□□ -2.19
UBE2A-208ENST00000628734 DNAH11Q96DT5 4516 aa1.36□□□□□ -2.19
UBE2A-208ENST00000628734 ANK2Q01484 3957 aa1.36□□□□□ -2.19
UBE2A-208ENST00000628734 VWFP04275 2813 aa1.36□□□□□ -2.19
UBE2A-208ENST00000628734 MEGF8Q7Z7M0 2845 aa1.36□□□□□ -2.19
UBE2A-208ENST00000628734 DCHS2Q6V1P9 2916 aa1.36□□□□□ -2.19
UBE2A-208ENST00000628734 TACC2O95359 2948 aa1.35□□□□□ -2.19
UBE2A-208ENST00000628734 TGP01266 2768 aa1.35□□□□□ -2.19
UBE2A-208ENST00000628734 MXRA5Q9NR99 2828 aa1.34□□□□□ -2.19
UBE2A-208ENST00000628734 ZNF469Q96JG9 3925 aaPredicted RBP1.34□□□□□ -2.19
UBE2A-208ENST00000628734 VPS13CQ709C8 3753 aa1.34□□□□□ -2.19
UBE2A-208ENST00000628734 TNP1P09430 55 aa1.34□□□□□ -2.19
UBE2A-208ENST00000628734 SMR3AQ99954 134 aa1.34□□□□□ -2.19
UBE2A-208ENST00000628734 NSD1Q96L73 2696 aaPredicted RBP1.34□□□□□ -2.2
UBE2A-208ENST00000628734 PCLOQ9Y6V0 5065 aa1.33□□□□□ -2.2
UBE2A-208ENST00000628734 ACANP16112 2415 aa1.33□□□□□ -2.2
UBE2A-208ENST00000628734 SONP18583 2426 aaKnown RBP1.33□□□□□ -2.2
UBE2A-208ENST00000628734 DEFB4AO15263 64 aa1.33□□□□□ -2.2
UBE2A-208ENST00000628734 EPPK1P58107 5090 aaKnown RBP1.33□□□□□ -2.2
UBE2A-208ENST00000628734 MYCBP2O75592 4640 aa1.32□□□□□ -2.2
UBE2A-208ENST00000628734 DEFB135Q30KP9 77 aa1.32□□□□□ -2.2
UBE2A-208ENST00000628734 MAP1AP78559 2803 aaPredicted RBP1.32□□□□□ -2.2
UBE2A-208ENST00000628734 HYDINQ4G0P3 5121 aa1.31□□□□□ -2.2
UBE2A-208ENST00000628734 MGAM2Q2M2H8 2515 aa1.3□□□□□ -2.2
UBE2A-208ENST00000628734 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
UBE2A-208ENST00000628734 RYR1P21817 5038 aa1.3□□□□□ -2.2
UBE2A-208ENST00000628734 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
UBE2A-208ENST00000628734 RYR2Q92736 4967 aa1.27□□□□□ -2.21
UBE2A-208ENST00000628734 TRRAPQ9Y4A5 3859 aa1.26□□□□□ -2.21
UBE2A-208ENST00000628734 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
UBE2A-208ENST00000628734 PRKDCP78527 4128 aaKnown RBP1.26□□□□□ -2.21
UBE2A-208ENST00000628734 HERC2O95714 4834 aa1.26□□□□□ -2.21
UBE2A-208ENST00000628734 C9orf92A6NGG3 77 aa1.24□□□□□ -2.21
UBE2A-208ENST00000628734 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
UBE2A-208ENST00000628734 RPS29P62273 56 aaKnown RBP1.24□□□□□ -2.21
UBE2A-208ENST00000628734 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
UBE2A-208ENST00000628734 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
UBE2A-208ENST00000628734 M0R2T5 61 aa1.23□□□□□ -2.21
UBE2A-208ENST00000628734 DNAH8Q96JB1 4490 aa1.22□□□□□ -2.21
UBE2A-208ENST00000628734 TENM3Q9P273 2699 aa1.22□□□□□ -2.21
UBE2A-208ENST00000628734 CSMD3Q7Z407 3707 aa1.22□□□□□ -2.21
UBE2A-208ENST00000628734 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
UBE2A-208ENST00000628734 ANK3Q12955 4377 aaKnown RBP1.21□□□□□ -2.22
UBE2A-208ENST00000628734 COL7A1Q02388 2944 aa1.21□□□□□ -2.22
UBE2A-208ENST00000628734 SACSQ9NZJ4 4579 aa1.2□□□□□ -2.22
UBE2A-208ENST00000628734 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
UBE2A-208ENST00000628734 KIAA1109Q2LD37 5005 aa1.2□□□□□ -2.22
UBE2A-208ENST00000628734 KRTAP10-4P60372 401 aaPredicted RBP1.2□□□□□ -2.22
UBE2A-208ENST00000628734 HERC1Q15751 4861 aa1.2□□□□□ -2.22
UBE2A-208ENST00000628734 LYSTQ99698 3801 aa1.19□□□□□ -2.22
UBE2A-208ENST00000628734 HRNRQ86YZ3 2850 aaPredicted RBP1.19□□□□□ -2.22
UBE2A-208ENST00000628734 STAB2Q8WWQ8 2551 aa1.18□□□□□ -2.22
UBE2A-208ENST00000628734 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
UBE2A-208ENST00000628734 KMT2AQ03164 3969 aa1.18□□□□□ -2.22
UBE2A-208ENST00000628734 KRTAP8-1Q8IUC2 63 aa1.17□□□□□ -2.22
UBE2A-208ENST00000628734 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
UBE2A-208ENST00000628734 DNAH1Q9P2D7 4330 aa1.16□□□□□ -2.22
UBE2A-208ENST00000628734 DNAH3Q8TD57 4116 aa1.16□□□□□ -2.22
UBE2A-208ENST00000628734 HECTD4Q9Y4D8 3996 aa1.15□□□□□ -2.23
UBE2A-208ENST00000628734 CMYA5Q8N3K9 4069 aa1.15□□□□□ -2.23
UBE2A-208ENST00000628734 FRAS1Q86XX4 4008 aa1.14□□□□□ -2.23
UBE2A-208ENST00000628734 DNAH2Q9P225 4427 aa1.14□□□□□ -2.23
UBE2A-208ENST00000628734 MUC2Q02817 5179 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms