RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 KRTAP10-5P60370 271 aa11.33□□□□□ -0.6
TCF4-259ENST00000627568 CRIPTQ9P021 101 aa11.33□□□□□ -0.6
TCF4-259ENST00000627568 HIST1H4AP62805 103 aaKnown RBP11.3□□□□□ -0.6
TCF4-259ENST00000627568 UQCRQO14949 82 aa11.29□□□□□ -0.6
TCF4-259ENST00000627568 IMUPQ9GZP8 106 aa11.29□□□□□ -0.6
TCF4-259ENST00000627568 FAM240AA0A1B0GVK7 77 aa11.28□□□□□ -0.6
TCF4-259ENST00000627568 ATOX1O00244 68 aa11.28□□□□□ -0.6
TCF4-259ENST00000627568 H0Y9P7 68 aa11.26□□□□□ -0.61
TCF4-259ENST00000627568 NEBP20929 6669 aa11.25□□□□□ -0.61
TCF4-259ENST00000627568 NDUFC1O43677 76 aa11.24□□□□□ -0.61
TCF4-259ENST00000627568 MUC12Q9UKN1 5478 aa11.24□□□□□ -0.61
TCF4-259ENST00000627568 H0YAA0 97 aa11.17□□□□□ -0.62
TCF4-259ENST00000627568 A8MUN3 132 aa11.13□□□□□ -0.63
TCF4-259ENST00000627568 LINC00643Q86TS7 51 aa11.06□□□□□ -0.64
TCF4-259ENST00000627568 LINC00208Q96KT6 92 aa11.06□□□□□ -0.64
TCF4-259ENST00000627568 ADM2Q7Z4H4 148 aa11.05□□□□□ -0.64
TCF4-259ENST00000627568 KRTAP5-9P26371 169 aa11.01□□□□□ -0.65
TCF4-259ENST00000627568 MP68P56378 58 aa11□□□□□ -0.65
TCF4-259ENST00000627568 KMT2DO14686 5537 aa10.95□□□□□ -0.66
TCF4-259ENST00000627568 OCR1Q9BZK8 76 aa10.92□□□□□ -0.66
TCF4-259ENST00000627568 PRO2289Q9P1D8 64 aa10.91□□□□□ -0.66
TCF4-259ENST00000627568 KRTAP20-1Q3LI63 56 aa10.89□□□□□ -0.67
TCF4-259ENST00000627568 MDN1Q9NU22 5596 aa10.89□□□□□ -0.67
TCF4-259ENST00000627568 PLAC4Q8WY50 150 aa10.84□□□□□ -0.67
TCF4-259ENST00000627568 C20orf197Q8N268 126 aa10.82□□□□□ -0.68
TCF4-259ENST00000627568 R4GN34 69 aa10.82□□□□□ -0.68
TCF4-259ENST00000627568 H3BPC8 53 aa10.79□□□□□ -0.68
TCF4-259ENST00000627568 MT1XP80297 61 aa10.76□□□□□ -0.69
TCF4-259ENST00000627568 P0C880 135 aa10.73□□□□□ -0.69
TCF4-259ENST00000627568 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
TCF4-259ENST00000627568 M0QZ58 72 aa10.71□□□□□ -0.69
TCF4-259ENST00000627568 A0A1B0GV90 55 aa10.7□□□□□ -0.7
TCF4-259ENST00000627568 SCGB1A1P11684 91 aa10.7□□□□□ -0.7
TCF4-259ENST00000627568 SPRR2FQ96RM1 72 aa10.69□□□□□ -0.7
TCF4-259ENST00000627568 J3QR89 54 aa10.68□□□□□ -0.7
TCF4-259ENST00000627568 KRTAP8-1Q8IUC2 63 aa10.6□□□□□ -0.71
TCF4-259ENST00000627568 SPRR2EP22531 72 aa10.58□□□□□ -0.72
TCF4-259ENST00000627568 SPRR2BP35325 72 aa10.58□□□□□ -0.72
TCF4-259ENST00000627568 SPRR2AP35326 72 aa10.58□□□□□ -0.72
TCF4-259ENST00000627568 LINC01554Q52M75 96 aa10.58□□□□□ -0.72
TCF4-259ENST00000627568 KRTAP12-2P59991 146 aa10.56□□□□□ -0.72
TCF4-259ENST00000627568 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
TCF4-259ENST00000627568 KRTAP2-3P0C7H8 128 aa10.54□□□□□ -0.72
TCF4-259ENST00000627568 KRTAP2-4Q9BYR9 128 aa10.54□□□□□ -0.72
TCF4-259ENST00000627568 TRAV7A0A075B6U4 112 aa10.52□□□□□ -0.73
TCF4-259ENST00000627568 ACYP2P14621 99 aa10.45□□□□□ -0.74
TCF4-259ENST00000627568 SPTSSBQ8NFR3 76 aa10.42□□□□□ -0.74
TCF4-259ENST00000627568 MT-ATP8P03928 68 aa10.37□□□□□ -0.75
TCF4-259ENST00000627568 LCE1AQ5T7P2 110 aa10.37□□□□□ -0.75
TCF4-259ENST00000627568 KRTAP4-8A0A0G2JLE6 195 aa10.34□□□□□ -0.75
TCF4-259ENST00000627568 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
TCF4-259ENST00000627568 KRTAP4-8Q9BYQ9 185 aa10.34□□□□□ -0.75
TCF4-259ENST00000627568 CHKB-CPT1BH3BT56 60 aa10.3□□□□□ -0.76
TCF4-259ENST00000627568 KRTAP10-7P60409 375 aaPredicted RBP10.27□□□□□ -0.77
TCF4-259ENST00000627568 SPRR2DP22532 72 aa10.23□□□□□ -0.77
TCF4-259ENST00000627568 KRTAP10-12P60413 245 aa10.22□□□□□ -0.77
TCF4-259ENST00000627568 KRTAP2-2Q9BYT5 123 aa10.2□□□□□ -0.78
TCF4-259ENST00000627568 KRTAP2-1Q9BYU5 128 aa10.2□□□□□ -0.78
TCF4-259ENST00000627568 K7ERU9 68 aa10.15□□□□□ -0.78
TCF4-259ENST00000627568 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
TCF4-259ENST00000627568 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
TCF4-259ENST00000627568 LCE3BQ5TA77 95 aa9.96□□□□□ -0.82
TCF4-259ENST00000627568 CAMK2N1Q7Z7J9 78 aa9.94□□□□□ -0.82
TCF4-259ENST00000627568 KRTAP13-4Q3LI77 160 aa9.93□□□□□ -0.82
TCF4-259ENST00000627568 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
TCF4-259ENST00000627568 COA5Q86WW8 74 aa9.77□□□□□ -0.85
TCF4-259ENST00000627568 SEC61GP60059 68 aa9.75□□□□□ -0.85
TCF4-259ENST00000627568 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
TCF4-259ENST00000627568 A0A0D9SG42 100 aa9.68□□□□□ -0.86
TCF4-259ENST00000627568 KRTAP19-7Q3SYF9 63 aa9.61□□□□□ -0.87
TCF4-259ENST00000627568 SPATA8Q6RVD6 105 aa9.58□□□□□ -0.88
TCF4-259ENST00000627568 LCE5AQ5TCM9 118 aa9.57□□□□□ -0.88
TCF4-259ENST00000627568 MT1EP04732 61 aa9.56□□□□□ -0.88
TCF4-259ENST00000627568 SPINT4Q6UDR6 99 aa9.56□□□□□ -0.88
TCF4-259ENST00000627568 A0A1B0GU33 70 aa9.55□□□□□ -0.88
TCF4-259ENST00000627568 KRTAP19-3Q7Z4W3 81 aa9.54□□□□□ -0.88
TCF4-259ENST00000627568 COX7CP15954 63 aa9.5□□□□□ -0.89
TCF4-259ENST00000627568 DSTQ03001 7570 aaKnown RBP9.48□□□□□ -0.89
TCF4-259ENST00000627568 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
TCF4-259ENST00000627568 H7BZZ5 65 aa9.4□□□□□ -0.9
TCF4-259ENST00000627568 KRTAP19-5Q3LI72 72 aa9.35□□□□□ -0.91
TCF4-259ENST00000627568 CYSTM1Q9H1C7 97 aa9.34□□□□□ -0.91
TCF4-259ENST00000627568 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
TCF4-259ENST00000627568 A0A1B0GU69 56 aa9.31□□□□□ -0.92
TCF4-259ENST00000627568 MT1GP13640 62 aa9.29□□□□□ -0.92
TCF4-259ENST00000627568 KRTAP4-9Q9BYQ8 210 aa9.28□□□□□ -0.92
TCF4-259ENST00000627568 PP632Q6XCG6 107 aa9.27□□□□□ -0.93
TCF4-259ENST00000627568 GPR98Q8WXG9 6306 aa9.24□□□□□ -0.93
TCF4-259ENST00000627568 A8MU10 97 aa9.18□□□□□ -0.94
TCF4-259ENST00000627568 MT1MQ8N339 61 aa9.12□□□□□ -0.95
TCF4-259ENST00000627568 MT1LQ93083 61 aa9.11□□□□□ -0.95
TCF4-259ENST00000627568 TNP1P09430 55 aa9.09□□□□□ -0.95
TCF4-259ENST00000627568 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
TCF4-259ENST00000627568 LCE1DQ5T752 114 aa9.06□□□□□ -0.96
TCF4-259ENST00000627568 LCE3AQ5TA76 89 aa9.06□□□□□ -0.96
TCF4-259ENST00000627568 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
TCF4-259ENST00000627568 LCE4AQ5TA78 99 aa9.02□□□□□ -0.97
TCF4-259ENST00000627568 PRR15LQ9BU68 103 aa9□□□□□ -0.97
TCF4-259ENST00000627568 MT4P47944 62 aa8.95□□□□□ -0.98
TCF4-259ENST00000627568 HMCN1Q96RW7 5635 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 610 ms