RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MP68P56378 58 aa10.13□□□□□ -0.79
SF1-220ENST00000626028 SPRR2GQ9BYE4 73 aa10.13□□□□□ -0.79
SF1-220ENST00000626028 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
SF1-220ENST00000626028 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
SF1-220ENST00000626028 NDUFC1O43677 76 aa10.08□□□□□ -0.8
SF1-220ENST00000626028 MACF1Q9UPN3 7388 aaKnown RBP10.08□□□□□ -0.8
SF1-220ENST00000626028 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
SF1-220ENST00000626028 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
SF1-220ENST00000626028 H3BPC8 53 aa10.05□□□□□ -0.8
SF1-220ENST00000626028 KRTAP19-8Q3LI54 63 aa10.04□□□□□ -0.8
SF1-220ENST00000626028 H0YAA0 97 aa10.03□□□□□ -0.8
SF1-220ENST00000626028 Q5VV11 94 aa10.03□□□□□ -0.8
SF1-220ENST00000626028 MT1BP07438 61 aa9.97□□□□□ -0.81
SF1-220ENST00000626028 SCGB1A1P11684 91 aa9.97□□□□□ -0.81
SF1-220ENST00000626028 SYNE2Q8WXH0 6885 aaKnown RBP9.94□□□□□ -0.82
SF1-220ENST00000626028 A6NN06 94 aa9.87□□□□□ -0.83
SF1-220ENST00000626028 K7ERU9 68 aa9.84□□□□□ -0.83
SF1-220ENST00000626028 DMAC1Q96GE9 116 aa9.83□□□□□ -0.84
SF1-220ENST00000626028 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
SF1-220ENST00000626028 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
SF1-220ENST00000626028 KRTAP10-5P60370 271 aa9.78□□□□□ -0.84
SF1-220ENST00000626028 KRTAP6-3Q3LI67 103 aa9.76□□□□□ -0.85
SF1-220ENST00000626028 MT-ATP8P03928 68 aa9.73□□□□□ -0.85
SF1-220ENST00000626028 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
SF1-220ENST00000626028 C20orf197Q8N268 126 aa9.71□□□□□ -0.86
SF1-220ENST00000626028 ACYP2P14621 99 aa9.62□□□□□ -0.87
SF1-220ENST00000626028 R4GN34 69 aa9.6□□□□□ -0.87
SF1-220ENST00000626028 P0C880 135 aa9.56□□□□□ -0.88
SF1-220ENST00000626028 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
SF1-220ENST00000626028 PRO2289Q9P1D8 64 aa9.52□□□□□ -0.89
SF1-220ENST00000626028 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
SF1-220ENST00000626028 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
SF1-220ENST00000626028 M0QZ58 72 aa9.48□□□□□ -0.89
SF1-220ENST00000626028 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
SF1-220ENST00000626028 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
SF1-220ENST00000626028 SNURFQ9Y675 71 aa9.41□□□□□ -0.9
SF1-220ENST00000626028 CHKB-CPT1BH3BT56 60 aa9.4□□□□□ -0.9
SF1-220ENST00000626028 KRTAP5-9P26371 169 aa9.38□□□□□ -0.91
SF1-220ENST00000626028 MT1XP80297 61 aa9.38□□□□□ -0.91
SF1-220ENST00000626028 NEBP20929 6669 aa9.35□□□□□ -0.91
SF1-220ENST00000626028 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
SF1-220ENST00000626028 MUC12Q9UKN1 5478 aa9.27□□□□□ -0.93
SF1-220ENST00000626028 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
SF1-220ENST00000626028 KMT2DO14686 5537 aa9.16□□□□□ -0.94
SF1-220ENST00000626028 COX7CP15954 63 aa9.12□□□□□ -0.95
SF1-220ENST00000626028 MDN1Q9NU22 5596 aa9.06□□□□□ -0.96
SF1-220ENST00000626028 COA5Q86WW8 74 aa9.06□□□□□ -0.96
SF1-220ENST00000626028 KRTAP8-1Q8IUC2 63 aa9.06□□□□□ -0.96
SF1-220ENST00000626028 SPRR2FQ96RM1 72 aa9.04□□□□□ -0.96
SF1-220ENST00000626028 H7BZZ5 65 aa8.97□□□□□ -0.97
SF1-220ENST00000626028 SEC61GP60059 68 aa8.97□□□□□ -0.97
SF1-220ENST00000626028 KRTAP20-1Q3LI63 56 aa8.96□□□□□ -0.98
SF1-220ENST00000626028 KRTAP10-12P60413 245 aa8.95□□□□□ -0.98
SF1-220ENST00000626028 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
SF1-220ENST00000626028 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
SF1-220ENST00000626028 KRTAP10-7P60409 375 aaPredicted RBP8.91□□□□□ -0.98
SF1-220ENST00000626028 KRTAP4-8A0A0G2JLE6 195 aa8.89□□□□□ -0.99
SF1-220ENST00000626028 SPRR2EP22531 72 aa8.89□□□□□ -0.99
SF1-220ENST00000626028 SPRR2BP35325 72 aa8.89□□□□□ -0.99
SF1-220ENST00000626028 SPRR2AP35326 72 aa8.89□□□□□ -0.99
SF1-220ENST00000626028 KRTAP4-8Q9BYQ9 185 aa8.89□□□□□ -0.99
SF1-220ENST00000626028 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
SF1-220ENST00000626028 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
SF1-220ENST00000626028 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
SF1-220ENST00000626028 LCE1AQ5T7P2 110 aa8.8□□□□□ -1
SF1-220ENST00000626028 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
SF1-220ENST00000626028 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
SF1-220ENST00000626028 A0A1B0GU33 70 aa8.76□□□□□ -1.01
SF1-220ENST00000626028 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
SF1-220ENST00000626028 A0A0D9SG42 100 aa8.66□□□□□ -1.02
SF1-220ENST00000626028 A0A1B0GU69 56 aa8.64□□□□□ -1.03
SF1-220ENST00000626028 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
SF1-220ENST00000626028 SPRR2DP22532 72 aa8.6□□□□□ -1.03
SF1-220ENST00000626028 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
SF1-220ENST00000626028 SPINT4Q6UDR6 99 aa8.57□□□□□ -1.04
SF1-220ENST00000626028 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
SF1-220ENST00000626028 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
SF1-220ENST00000626028 KRTAP2-2Q9BYT5 123 aa8.52□□□□□ -1.05
SF1-220ENST00000626028 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
SF1-220ENST00000626028 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
SF1-220ENST00000626028 KRTAP19-7Q3SYF9 63 aa8.39□□□□□ -1.07
SF1-220ENST00000626028 LCE3BQ5TA77 95 aa8.37□□□□□ -1.07
SF1-220ENST00000626028 TMEM258P61165 79 aa8.36□□□□□ -1.07
SF1-220ENST00000626028 LINC01558Q9Y6Z2 57 aa8.35□□□□□ -1.07
SF1-220ENST00000626028 A8MU10 97 aa8.34□□□□□ -1.07
SF1-220ENST00000626028 MT1EP04732 61 aa8.31□□□□□ -1.08
SF1-220ENST00000626028 LCE5AQ5TCM9 118 aa8.28□□□□□ -1.08
SF1-220ENST00000626028 KRTAP19-3Q7Z4W3 81 aa8.25□□□□□ -1.09
SF1-220ENST00000626028 TNP1P09430 55 aa8.19□□□□□ -1.1
SF1-220ENST00000626028 KRTAP19-5Q3LI72 72 aa8.17□□□□□ -1.1
SF1-220ENST00000626028 UQCR11O14957 56 aa8.16□□□□□ -1.1
SF1-220ENST00000626028 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
SF1-220ENST00000626028 MT1GP13640 62 aa8.11□□□□□ -1.11
SF1-220ENST00000626028 DSTQ03001 7570 aaKnown RBP8.09□□□□□ -1.12
SF1-220ENST00000626028 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
SF1-220ENST00000626028 LCE3AQ5TA76 89 aa8.02□□□□□ -1.13
SF1-220ENST00000626028 MT1LQ93083 61 aa7.96□□□□□ -1.14
SF1-220ENST00000626028 V9GYY9 64 aa7.96□□□□□ -1.14
SF1-220ENST00000626028 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
SF1-220ENST00000626028 MT1MQ8N339 61 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms