RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
NPLOC4-221ENST00000625705 MUC2Q02817 5179 aa3.6□□□□□ -1.83
NPLOC4-221ENST00000625705 A0A087WVE0 104 aa3.59□□□□□ -1.83
NPLOC4-221ENST00000625705 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.83
NPLOC4-221ENST00000625705 C4orf26Q17RF5 130 aa3.58□□□□□ -1.84
NPLOC4-221ENST00000625705 UQCRQO14949 82 aa3.57□□□□□ -1.84
NPLOC4-221ENST00000625705 H0Y9P7 68 aa3.56□□□□□ -1.84
NPLOC4-221ENST00000625705 ATOX1O00244 68 aa3.56□□□□□ -1.84
NPLOC4-221ENST00000625705 SCGB1A1P11684 91 aa3.56□□□□□ -1.84
NPLOC4-221ENST00000625705 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
NPLOC4-221ENST00000625705 LOC101927531A0A1B0GV80 90 aa3.55□□□□□ -1.84
NPLOC4-221ENST00000625705 MT3P25713 68 aa3.54□□□□□ -1.84
NPLOC4-221ENST00000625705 MP68P56378 58 aa3.54□□□□□ -1.84
NPLOC4-221ENST00000625705 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
NPLOC4-221ENST00000625705 C1orf64Q8NEQ6 169 aa3.53□□□□□ -1.84
NPLOC4-221ENST00000625705 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
NPLOC4-221ENST00000625705 LINC00208Q96KT6 92 aa3.51□□□□□ -1.85
NPLOC4-221ENST00000625705 S4R3F8 94 aa3.5□□□□□ -1.85
NPLOC4-221ENST00000625705 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
NPLOC4-221ENST00000625705 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
NPLOC4-221ENST00000625705 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
NPLOC4-221ENST00000625705 IMUPQ9GZP8 106 aa3.49□□□□□ -1.85
NPLOC4-221ENST00000625705 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
NPLOC4-221ENST00000625705 FAM236AA0A1B0GUQ0 79 aa3.47□□□□□ -1.85
NPLOC4-221ENST00000625705 FAM236BA0A1B0GV22 79 aa3.47□□□□□ -1.85
NPLOC4-221ENST00000625705 MT2AP02795 61 aa3.46□□□□□ -1.86
NPLOC4-221ENST00000625705 H3BPC8 53 aa3.45□□□□□ -1.86
NPLOC4-221ENST00000625705 CSAG1Q6PB30 78 aa3.45□□□□□ -1.86
NPLOC4-221ENST00000625705 SMIM20Q8N5G0 67 aa3.45□□□□□ -1.86
NPLOC4-221ENST00000625705 MT1FP04733 61 aa3.44□□□□□ -1.86
NPLOC4-221ENST00000625705 LCA10Q71F78 164 aa3.44□□□□□ -1.86
NPLOC4-221ENST00000625705 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
NPLOC4-221ENST00000625705 TRAV7A0A075B6U4 112 aa3.42□□□□□ -1.86
NPLOC4-221ENST00000625705 A8MUN3 132 aa3.42□□□□□ -1.86
NPLOC4-221ENST00000625705 NDUFC1O43677 76 aa3.41□□□□□ -1.86
NPLOC4-221ENST00000625705 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
NPLOC4-221ENST00000625705 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
NPLOC4-221ENST00000625705 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
NPLOC4-221ENST00000625705 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
NPLOC4-221ENST00000625705 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
NPLOC4-221ENST00000625705 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
NPLOC4-221ENST00000625705 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
NPLOC4-221ENST00000625705 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
NPLOC4-221ENST00000625705 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
NPLOC4-221ENST00000625705 ACYP2P14621 99 aa3.32□□□□□ -1.88
NPLOC4-221ENST00000625705 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
NPLOC4-221ENST00000625705 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
NPLOC4-221ENST00000625705 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
NPLOC4-221ENST00000625705 H0YAA0 97 aa3.28□□□□□ -1.88
NPLOC4-221ENST00000625705 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
NPLOC4-221ENST00000625705 COX7CP15954 63 aa3.27□□□□□ -1.89
NPLOC4-221ENST00000625705 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
NPLOC4-221ENST00000625705 Q5VV11 94 aa3.26□□□□□ -1.89
NPLOC4-221ENST00000625705 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
NPLOC4-221ENST00000625705 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
NPLOC4-221ENST00000625705 CCDC179H3BU77 68 aa3.23□□□□□ -1.89
NPLOC4-221ENST00000625705 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
NPLOC4-221ENST00000625705 R4GN34 69 aa3.23□□□□□ -1.89
NPLOC4-221ENST00000625705 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
NPLOC4-221ENST00000625705 M0QZ58 72 aa3.2□□□□□ -1.9
NPLOC4-221ENST00000625705 P0C880 135 aa3.2□□□□□ -1.9
NPLOC4-221ENST00000625705 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
NPLOC4-221ENST00000625705 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
NPLOC4-221ENST00000625705 COA5Q86WW8 74 aa3.19□□□□□ -1.9
NPLOC4-221ENST00000625705 H7BZZ5 65 aa3.18□□□□□ -1.9
NPLOC4-221ENST00000625705 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
NPLOC4-221ENST00000625705 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
NPLOC4-221ENST00000625705 A6NN06 94 aa3.17□□□□□ -1.9
NPLOC4-221ENST00000625705 MT1BP07438 61 aa3.17□□□□□ -1.9
NPLOC4-221ENST00000625705 TMEM258P61165 79 aa3.17□□□□□ -1.9
NPLOC4-221ENST00000625705 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
NPLOC4-221ENST00000625705 SEC61GP60059 68 aa3.16□□□□□ -1.9
NPLOC4-221ENST00000625705 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
NPLOC4-221ENST00000625705 CYSTM1Q9H1C7 97 aa3.16□□□□□ -1.9
NPLOC4-221ENST00000625705 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
NPLOC4-221ENST00000625705 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
NPLOC4-221ENST00000625705 SERP1Q9Y6X1 66 aa3.14□□□□□ -1.91
NPLOC4-221ENST00000625705 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
NPLOC4-221ENST00000625705 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
NPLOC4-221ENST00000625705 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
NPLOC4-221ENST00000625705 USH2AO75445 5202 aa3.08□□□□□ -1.92
NPLOC4-221ENST00000625705 A0A1B0GU69 56 aa3.07□□□□□ -1.92
NPLOC4-221ENST00000625705 SMIM26A0A096LP01 95 aa3.06□□□□□ -1.92
NPLOC4-221ENST00000625705 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
NPLOC4-221ENST00000625705 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
NPLOC4-221ENST00000625705 A0A1B0GU33 70 aa3.03□□□□□ -1.92
NPLOC4-221ENST00000625705 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
NPLOC4-221ENST00000625705 A0A0D9SG42 100 aa3.02□□□□□ -1.93
NPLOC4-221ENST00000625705 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
NPLOC4-221ENST00000625705 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
NPLOC4-221ENST00000625705 MT1XP80297 61 aa3.01□□□□□ -1.93
NPLOC4-221ENST00000625705 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
NPLOC4-221ENST00000625705 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
NPLOC4-221ENST00000625705 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
NPLOC4-221ENST00000625705 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
NPLOC4-221ENST00000625705 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
NPLOC4-221ENST00000625705 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
NPLOC4-221ENST00000625705 V9GYY9 64 aa2.97□□□□□ -1.93
NPLOC4-221ENST00000625705 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
NPLOC4-221ENST00000625705 BRK1Q8WUW1 75 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms