RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
ATRX-209ENST00000623242 Q5XG85 94 aa2.34□□□□□ -2.03
ATRX-209ENST00000623242 CAMK2N1Q7Z7J9 78 aa2.34□□□□□ -2.03
ATRX-209ENST00000623242 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
ATRX-209ENST00000623242 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
ATRX-209ENST00000623242 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
ATRX-209ENST00000623242 ACYP2P14621 99 aa2.33□□□□□ -2.04
ATRX-209ENST00000623242 KRTAP13-3Q3SY46 172 aa2.33□□□□□ -2.04
ATRX-209ENST00000623242 C1orf195Q5TG92 126 aa2.33□□□□□ -2.04
ATRX-209ENST00000623242 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
ATRX-209ENST00000623242 HERC2O95714 4834 aa2.33□□□□□ -2.04
ATRX-209ENST00000623242 PKD1P98161 4303 aa2.32□□□□□ -2.04
ATRX-209ENST00000623242 APOBP04114 4563 aaKnown RBP2.32□□□□□ -2.04
ATRX-209ENST00000623242 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
ATRX-209ENST00000623242 MMP24-AS1A0A0U1RRL7 71 aa2.31□□□□□ -2.04
ATRX-209ENST00000623242 CYP4F30PQ9H0H9 118 aa2.31□□□□□ -2.04
ATRX-209ENST00000623242 PKHD1P08F94 4074 aa2.31□□□□□ -2.04
ATRX-209ENST00000623242 HECTD4Q9Y4D8 3996 aa2.3□□□□□ -2.04
ATRX-209ENST00000623242 DNAH8Q96JB1 4490 aa2.3□□□□□ -2.04
ATRX-209ENST00000623242 Q96NJ1 140 aa2.3□□□□□ -2.04
ATRX-209ENST00000623242 PCOTHQ58A44 107 aa2.29□□□□□ -2.04
ATRX-209ENST00000623242 FAT1Q14517 4588 aa2.28□□□□□ -2.04
ATRX-209ENST00000623242 ATP11AUNQ6ZP68 121 aa2.28□□□□□ -2.04
ATRX-209ENST00000623242 A8MUN3 132 aa2.27□□□□□ -2.05
ATRX-209ENST00000623242 Q1T7F1 81 aa2.27□□□□□ -2.05
ATRX-209ENST00000623242 HSPG2P98160 4391 aa2.27□□□□□ -2.05
ATRX-209ENST00000623242 HERC1Q15751 4861 aa2.26□□□□□ -2.05
ATRX-209ENST00000623242 C7orf65Q6ZTY9 151 aa2.26□□□□□ -2.05
ATRX-209ENST00000623242 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATRX-209ENST00000623242 ZCCHC13Q8WW36 166 aaKnown RBP2.26□□□□□ -2.05
ATRX-209ENST00000623242 ABCA13Q86UQ4 5058 aa2.25□□□□□ -2.05
ATRX-209ENST00000623242 FP248Q71RG6 208 aaPredicted RBP2.25□□□□□ -2.05
ATRX-209ENST00000623242 COA5Q86WW8 74 aa2.25□□□□□ -2.05
ATRX-209ENST00000623242 PRO0628Q9UI54 55 aa2.25□□□□□ -2.05
ATRX-209ENST00000623242 A6NED7 52 aa2.24□□□□□ -2.05
ATRX-209ENST00000623242 OXTP01178 125 aa2.24□□□□□ -2.05
ATRX-209ENST00000623242 KRTAP10-4P60372 401 aaPredicted RBP2.24□□□□□ -2.05
ATRX-209ENST00000623242 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
ATRX-209ENST00000623242 KRTAP13-2Q52LG2 175 aa2.24□□□□□ -2.05
ATRX-209ENST00000623242 CYSTM1Q9H1C7 97 aa2.24□□□□□ -2.05
ATRX-209ENST00000623242 A0A1B0GU69 56 aa2.23□□□□□ -2.05
ATRX-209ENST00000623242 C4orf26Q17RF5 130 aa2.23□□□□□ -2.05
ATRX-209ENST00000623242 RETNLBQ9BQ08 111 aa2.23□□□□□ -2.05
ATRX-209ENST00000623242 K7ERS5 55 aa2.22□□□□□ -2.05
ATRX-209ENST00000623242 PSPHP1O15172 72 aa2.22□□□□□ -2.05
ATRX-209ENST00000623242 Q5W150 140 aa2.22□□□□□ -2.05
ATRX-209ENST00000623242 HRES1P13985 223 aa2.21□□□□□ -2.06
ATRX-209ENST00000623242 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
ATRX-209ENST00000623242 C9orf92A6NGG3 77 aa2.2□□□□□ -2.06
ATRX-209ENST00000623242 DMAC1Q96GE9 116 aa2.2□□□□□ -2.06
ATRX-209ENST00000623242 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
ATRX-209ENST00000623242 UQCR11O14957 56 aa2.19□□□□□ -2.06
ATRX-209ENST00000623242 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
ATRX-209ENST00000623242 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
ATRX-209ENST00000623242 FSIP2Q5CZC0 6907 aa2.19□□□□□ -2.06
ATRX-209ENST00000623242 SRRM2Q9UQ35 2752 aaKnown RBP2.18□□□□□ -2.06
ATRX-209ENST00000623242 PMAIP1Q13794 54 aa2.18□□□□□ -2.06
ATRX-209ENST00000623242 C20orf166-AS1Q96NR2 134 aa2.18□□□□□ -2.06
ATRX-209ENST00000623242 RBM12B-AS1Q9P1G2 102 aa2.18□□□□□ -2.06
ATRX-209ENST00000623242 A8MUU9 505 aa2.17□□□□□ -2.06
ATRX-209ENST00000623242 MT1HL1P0DM35 61 aa2.17□□□□□ -2.06
ATRX-209ENST00000623242 SPINK7P58062 85 aa2.17□□□□□ -2.06
ATRX-209ENST00000623242 FLG2Q5D862 2391 aaPredicted RBP2.17□□□□□ -2.06
ATRX-209ENST00000623242 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
ATRX-209ENST00000623242 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
ATRX-209ENST00000623242 LRP1Q07954 4544 aaKnown RBP2.16□□□□□ -2.06
ATRX-209ENST00000623242 MYCBP2O75592 4640 aa2.15□□□□□ -2.06
ATRX-209ENST00000623242 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
ATRX-209ENST00000623242 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
ATRX-209ENST00000623242 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
ATRX-209ENST00000623242 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
ATRX-209ENST00000623242 COX6B2Q6YFQ2 88 aa2.13□□□□□ -2.07
ATRX-209ENST00000623242 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
ATRX-209ENST00000623242 Q5VV11 94 aa2.12□□□□□ -2.07
ATRX-209ENST00000623242 FAT4Q6V0I7 4981 aa2.11□□□□□ -2.07
ATRX-209ENST00000623242 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
ATRX-209ENST00000623242 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
ATRX-209ENST00000623242 TNXBP22105 4242 aa2.1□□□□□ -2.07
ATRX-209ENST00000623242 A0A1B0GU33 70 aa2.1□□□□□ -2.07
ATRX-209ENST00000623242 CSAG1Q6PB30 78 aa2.1□□□□□ -2.07
ATRX-209ENST00000623242 S4R3F8 94 aa2.1□□□□□ -2.07
ATRX-209ENST00000623242 DMBT1Q9UGM3 2413 aaPredicted RBP2.1□□□□□ -2.07
ATRX-209ENST00000623242 H1FX-AS1Q4G0G2 97 aa2.09□□□□□ -2.07
ATRX-209ENST00000623242 SPATA8Q6RVD6 105 aa2.08□□□□□ -2.08
ATRX-209ENST00000623242 RNF213Q63HN8 5207 aa2.08□□□□□ -2.08
ATRX-209ENST00000623242 HMCN2Q8NDA2 5059 aa2.07□□□□□ -2.08
ATRX-209ENST00000623242 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
ATRX-209ENST00000623242 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
ATRX-209ENST00000623242 LCA10Q71F78 164 aa2.04□□□□□ -2.08
ATRX-209ENST00000623242 M0QZ58 72 aa2.03□□□□□ -2.08
ATRX-209ENST00000623242 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
ATRX-209ENST00000623242 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
ATRX-209ENST00000623242 LPAP08519 4548 aa2.03□□□□□ -2.09
ATRX-209ENST00000623242 NEBP20929 6669 aa2.02□□□□□ -2.09
ATRX-209ENST00000623242 LRP2P98164 4655 aa2.02□□□□□ -2.09
ATRX-209ENST00000623242 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
ATRX-209ENST00000623242 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
ATRX-209ENST00000623242 R4GN34 69 aa2□□□□□ -2.09
ATRX-209ENST00000623242 ADM2Q7Z4H4 148 aa1.99□□□□□ -2.09
ATRX-209ENST00000623242 CRIPTQ9P021 101 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms