RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
SYNRG-229ENST00000621136 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
SYNRG-229ENST00000621136 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
SYNRG-229ENST00000621136 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
SYNRG-229ENST00000621136 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
SYNRG-229ENST00000621136 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
SYNRG-229ENST00000621136 J3QL48 77 aa6.27□□□□□ -1.41
SYNRG-229ENST00000621136 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
SYNRG-229ENST00000621136 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
SYNRG-229ENST00000621136 FAT1Q14517 4588 aa6.24□□□□□ -1.41
SYNRG-229ENST00000621136 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
SYNRG-229ENST00000621136 PKD1P98161 4303 aa6.24□□□□□ -1.41
SYNRG-229ENST00000621136 Q5VSD8 79 aa6.21□□□□□ -1.42
SYNRG-229ENST00000621136 DNHD1Q96M86 4753 aa6.21□□□□□ -1.42
SYNRG-229ENST00000621136 TNP1P09430 55 aa6.2□□□□□ -1.42
SYNRG-229ENST00000621136 M0R2T5 61 aa6.2□□□□□ -1.42
SYNRG-229ENST00000621136 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
SYNRG-229ENST00000621136 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
SYNRG-229ENST00000621136 XP32Q5T750 250 aa6.14□□□□□ -1.43
SYNRG-229ENST00000621136 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
SYNRG-229ENST00000621136 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
SYNRG-229ENST00000621136 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
SYNRG-229ENST00000621136 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
SYNRG-229ENST00000621136 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
SYNRG-229ENST00000621136 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
SYNRG-229ENST00000621136 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
SYNRG-229ENST00000621136 HSPG2P98160 4391 aa5.99□□□□□ -1.45
SYNRG-229ENST00000621136 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
SYNRG-229ENST00000621136 PKHD1L1Q86WI1 4243 aa5.92□□□□□ -1.46
SYNRG-229ENST00000621136 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
SYNRG-229ENST00000621136 LPAP08519 4548 aa5.79□□□□□ -1.48
SYNRG-229ENST00000621136 LRP2P98164 4655 aa5.77□□□□□ -1.49
SYNRG-229ENST00000621136 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
SYNRG-229ENST00000621136 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
SYNRG-229ENST00000621136 TNXBP22105 4242 aa5.72□□□□□ -1.49
SYNRG-229ENST00000621136 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
SYNRG-229ENST00000621136 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
SYNRG-229ENST00000621136 KIAA1109Q2LD37 5005 aa5.61□□□□□ -1.51
SYNRG-229ENST00000621136 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
SYNRG-229ENST00000621136 RYR2Q92736 4967 aa5.59□□□□□ -1.51
SYNRG-229ENST00000621136 INE1O15225 51 aa5.55□□□□□ -1.52
SYNRG-229ENST00000621136 RYR1P21817 5038 aa5.54□□□□□ -1.52
SYNRG-229ENST00000621136 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
SYNRG-229ENST00000621136 RYR3Q15413 4870 aa5.49□□□□□ -1.53
SYNRG-229ENST00000621136 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
SYNRG-229ENST00000621136 KRTAP21-3Q3LHN1 58 aa5.4□□□□□ -1.55
SYNRG-229ENST00000621136 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
SYNRG-229ENST00000621136 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
SYNRG-229ENST00000621136 MUC2Q02817 5179 aa5.31□□□□□ -1.56
SYNRG-229ENST00000621136 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
SYNRG-229ENST00000621136 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
SYNRG-229ENST00000621136 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
SYNRG-229ENST00000621136 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
SYNRG-229ENST00000621136 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
SYNRG-229ENST00000621136 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
SYNRG-229ENST00000621136 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
SYNRG-229ENST00000621136 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.6
SYNRG-229ENST00000621136 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
SYNRG-229ENST00000621136 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
SYNRG-229ENST00000621136 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
SYNRG-229ENST00000621136 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
SYNRG-229ENST00000621136 HERC2O95714 4834 aa5□□□□□ -1.61
SYNRG-229ENST00000621136 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.62
SYNRG-229ENST00000621136 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
SYNRG-229ENST00000621136 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
SYNRG-229ENST00000621136 HERC1Q15751 4861 aa4.83□□□□□ -1.64
SYNRG-229ENST00000621136 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
SYNRG-229ENST00000621136 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
SYNRG-229ENST00000621136 HMCN2Q8NDA2 5059 aa4.78□□□□□ -1.64
SYNRG-229ENST00000621136 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
SYNRG-229ENST00000621136 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
SYNRG-229ENST00000621136 MT1FP04733 61 aa4.74□□□□□ -1.65
SYNRG-229ENST00000621136 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
SYNRG-229ENST00000621136 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SYNRG-229ENST00000621136 UBR4Q5T4S7 5183 aa4.7□□□□□ -1.66
SYNRG-229ENST00000621136 MT2AP02795 61 aa4.69□□□□□ -1.66
SYNRG-229ENST00000621136 MT1HP80294 61 aa4.67□□□□□ -1.66
SYNRG-229ENST00000621136 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SYNRG-229ENST00000621136 MT1XP80297 61 aa4.63□□□□□ -1.67
SYNRG-229ENST00000621136 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
SYNRG-229ENST00000621136 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
SYNRG-229ENST00000621136 MT1BP07438 61 aa4.59□□□□□ -1.67
SYNRG-229ENST00000621136 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
SYNRG-229ENST00000621136 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
SYNRG-229ENST00000621136 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
SYNRG-229ENST00000621136 KMT2DO14686 5537 aa4.5□□□□□ -1.69
SYNRG-229ENST00000621136 USH2AO75445 5202 aa4.44□□□□□ -1.7
SYNRG-229ENST00000621136 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
SYNRG-229ENST00000621136 KRTAP4-8A0A0G2JLE6 195 aa4.38□□□□□ -1.71
SYNRG-229ENST00000621136 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
SYNRG-229ENST00000621136 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
SYNRG-229ENST00000621136 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
SYNRG-229ENST00000621136 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
SYNRG-229ENST00000621136 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
SYNRG-229ENST00000621136 MT1GP13640 62 aa4.24□□□□□ -1.73
SYNRG-229ENST00000621136 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
SYNRG-229ENST00000621136 LCE2BO14633 110 aa4.21□□□□□ -1.74
SYNRG-229ENST00000621136 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
SYNRG-229ENST00000621136 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
SYNRG-229ENST00000621136 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms