RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 LINC00643Q86TS7 51 aa13.04□□□□□ -0.32
SEMA3B-215ENST00000621029 SPRR2GQ9BYE4 73 aa13.02□□□□□ -0.33
SEMA3B-215ENST00000621029 MT1BP07438 61 aa12.97□□□□□ -0.33
SEMA3B-215ENST00000621029 A6NN06 94 aa12.94□□□□□ -0.34
SEMA3B-215ENST00000621029 KRTAP19-8Q3LI54 63 aa12.94□□□□□ -0.34
SEMA3B-215ENST00000621029 NDUFC1O43677 76 aa12.92□□□□□ -0.34
SEMA3B-215ENST00000621029 A0A1B0GV90 55 aa12.9□□□□□ -0.34
SEMA3B-215ENST00000621029 LINC00208Q96KT6 92 aa12.9□□□□□ -0.34
SEMA3B-215ENST00000621029 IMUPQ9GZP8 106 aa12.89□□□□□ -0.35
SEMA3B-215ENST00000621029 CRIPTQ9P021 101 aa12.85□□□□□ -0.35
SEMA3B-215ENST00000621029 MP68P56378 58 aa12.84□□□□□ -0.35
SEMA3B-215ENST00000621029 KRTAP6-3Q3LI67 103 aa12.84□□□□□ -0.35
SEMA3B-215ENST00000621029 A8MUN3 132 aa12.82□□□□□ -0.36
SEMA3B-215ENST00000621029 OCR1Q9BZK8 76 aa12.77□□□□□ -0.37
SEMA3B-215ENST00000621029 H0YAA0 97 aa12.72□□□□□ -0.37
SEMA3B-215ENST00000621029 J3QR89 54 aa12.71□□□□□ -0.37
SEMA3B-215ENST00000621029 KRTAP10-5P60370 271 aa12.7□□□□□ -0.38
SEMA3B-215ENST00000621029 ADM2Q7Z4H4 148 aa12.68□□□□□ -0.38
SEMA3B-215ENST00000621029 SCGB1A1P11684 91 aa12.62□□□□□ -0.39
SEMA3B-215ENST00000621029 H3BPC8 53 aa12.57□□□□□ -0.4
SEMA3B-215ENST00000621029 NEBP20929 6669 aa12.47□□□□□ -0.41
SEMA3B-215ENST00000621029 DMAC1Q96GE9 116 aa12.43□□□□□ -0.42
SEMA3B-215ENST00000621029 C20orf197Q8N268 126 aa12.38□□□□□ -0.43
SEMA3B-215ENST00000621029 R4GN34 69 aa12.37□□□□□ -0.43
SEMA3B-215ENST00000621029 P0C880 135 aa12.34□□□□□ -0.43
SEMA3B-215ENST00000621029 MUC12Q9UKN1 5478 aa12.34□□□□□ -0.43
SEMA3B-215ENST00000621029 PLAC4Q8WY50 150 aa12.33□□□□□ -0.44
SEMA3B-215ENST00000621029 PRO2289Q9P1D8 64 aa12.29□□□□□ -0.44
SEMA3B-215ENST00000621029 M0QZ58 72 aa12.27□□□□□ -0.45
SEMA3B-215ENST00000621029 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
SEMA3B-215ENST00000621029 TRAV7A0A075B6U4 112 aa12.19□□□□□ -0.46
SEMA3B-215ENST00000621029 KRTAP5-9P26371 169 aa12.19□□□□□ -0.46
SEMA3B-215ENST00000621029 SMIM20Q8N5G0 67 aa12.19□□□□□ -0.46
SEMA3B-215ENST00000621029 ACYP2P14621 99 aa12.18□□□□□ -0.46
SEMA3B-215ENST00000621029 K7ERU9 68 aa12.17□□□□□ -0.46
SEMA3B-215ENST00000621029 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
SEMA3B-215ENST00000621029 MT1XP80297 61 aa12.16□□□□□ -0.46
SEMA3B-215ENST00000621029 LINC01554Q52M75 96 aa12.16□□□□□ -0.46
SEMA3B-215ENST00000621029 KMT2DO14686 5537 aa12.13□□□□□ -0.47
SEMA3B-215ENST00000621029 SPTSSBQ8NFR3 76 aa12.08□□□□□ -0.48
SEMA3B-215ENST00000621029 MDN1Q9NU22 5596 aa12.07□□□□□ -0.48
SEMA3B-215ENST00000621029 CHKB-CPT1BH3BT56 60 aa12.03□□□□□ -0.48
SEMA3B-215ENST00000621029 SNURFQ9Y675 71 aa11.97□□□□□ -0.49
SEMA3B-215ENST00000621029 KRTAP20-1Q3LI63 56 aa11.96□□□□□ -0.49
SEMA3B-215ENST00000621029 SPRR2FQ96RM1 72 aa11.93□□□□□ -0.5
SEMA3B-215ENST00000621029 KRTAP8-1Q8IUC2 63 aa11.89□□□□□ -0.51
SEMA3B-215ENST00000621029 KRTAP12-2P59991 146 aa11.86□□□□□ -0.51
SEMA3B-215ENST00000621029 SPRR2EP22531 72 aa11.77□□□□□ -0.53
SEMA3B-215ENST00000621029 SPRR2BP35325 72 aa11.77□□□□□ -0.53
SEMA3B-215ENST00000621029 SPRR2AP35326 72 aa11.77□□□□□ -0.53
SEMA3B-215ENST00000621029 SPANXA2-OT1Q8N9U9 137 aa11.76□□□□□ -0.53
SEMA3B-215ENST00000621029 SERP2Q8N6R1 65 aa11.73□□□□□ -0.53
SEMA3B-215ENST00000621029 KRTAP4-8A0A0G2JLE6 195 aa11.68□□□□□ -0.54
SEMA3B-215ENST00000621029 KRTAP4-8Q9BYQ9 185 aa11.68□□□□□ -0.54
SEMA3B-215ENST00000621029 KRTAP10-7P60409 375 aaPredicted RBP11.63□□□□□ -0.55
SEMA3B-215ENST00000621029 KRTAP2-3P0C7H8 128 aa11.62□□□□□ -0.55
SEMA3B-215ENST00000621029 KRTAP2-4Q9BYR9 128 aa11.62□□□□□ -0.55
SEMA3B-215ENST00000621029 KRTAP10-12P60413 245 aa11.54□□□□□ -0.56
SEMA3B-215ENST00000621029 LCE1AQ5T7P2 110 aa11.54□□□□□ -0.56
SEMA3B-215ENST00000621029 KRTAP13-4Q3LI77 160 aa11.48□□□□□ -0.57
SEMA3B-215ENST00000621029 COA5Q86WW8 74 aa11.48□□□□□ -0.57
SEMA3B-215ENST00000621029 CAMK2N1Q7Z7J9 78 aa11.42□□□□□ -0.58
SEMA3B-215ENST00000621029 SPRR2DP22532 72 aa11.38□□□□□ -0.59
SEMA3B-215ENST00000621029 SEC61GP60059 68 aa11.38□□□□□ -0.59
SEMA3B-215ENST00000621029 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
SEMA3B-215ENST00000621029 COX7CP15954 63 aa11.34□□□□□ -0.59
SEMA3B-215ENST00000621029 A0A0D9SG42 100 aa11.25□□□□□ -0.61
SEMA3B-215ENST00000621029 KRTAP2-2Q9BYT5 123 aa11.24□□□□□ -0.61
SEMA3B-215ENST00000621029 KRTAP2-1Q9BYU5 128 aa11.24□□□□□ -0.61
SEMA3B-215ENST00000621029 H7BZZ5 65 aa11.16□□□□□ -0.62
SEMA3B-215ENST00000621029 SPATA8Q6RVD6 105 aa11.16□□□□□ -0.62
SEMA3B-215ENST00000621029 CYSTM1Q9H1C7 97 aa11.15□□□□□ -0.62
SEMA3B-215ENST00000621029 A0A1B0GU33 70 aa11.14□□□□□ -0.63
SEMA3B-215ENST00000621029 SPINT4Q6UDR6 99 aa11.1□□□□□ -0.63
SEMA3B-215ENST00000621029 LCE3BQ5TA77 95 aa11.05□□□□□ -0.64
SEMA3B-215ENST00000621029 ANAPC13Q9BS18 74 aa10.99□□□□□ -0.65
SEMA3B-215ENST00000621029 A0A1B0GU69 56 aa10.94□□□□□ -0.66
SEMA3B-215ENST00000621029 KRTAP12-1P59990 96 aa10.91□□□□□ -0.66
SEMA3B-215ENST00000621029 KRTAP19-7Q3SYF9 63 aa10.86□□□□□ -0.67
SEMA3B-215ENST00000621029 SMIM26A0A096LP01 95 aa10.83□□□□□ -0.68
SEMA3B-215ENST00000621029 MT1EP04732 61 aa10.79□□□□□ -0.68
SEMA3B-215ENST00000621029 CCDC179H3BU77 68 aa10.77□□□□□ -0.69
SEMA3B-215ENST00000621029 A8MU10 97 aa10.73□□□□□ -0.69
SEMA3B-215ENST00000621029 LCE5AQ5TCM9 118 aa10.72□□□□□ -0.69
SEMA3B-215ENST00000621029 KRTAP19-3Q7Z4W3 81 aa10.71□□□□□ -0.69
SEMA3B-215ENST00000621029 KRTAP19-5Q3LI72 72 aa10.64□□□□□ -0.71
SEMA3B-215ENST00000621029 DSTQ03001 7570 aaKnown RBP10.62□□□□□ -0.71
SEMA3B-215ENST00000621029 PRR15LQ9BU68 103 aa10.61□□□□□ -0.71
SEMA3B-215ENST00000621029 ATP5EP56381 51 aaPredicted RBP10.59□□□□□ -0.71
SEMA3B-215ENST00000621029 PCP4P48539 62 aa10.58□□□□□ -0.72
SEMA3B-215ENST00000621029 TNP1P09430 55 aa10.46□□□□□ -0.73
SEMA3B-215ENST00000621029 MT1GP13640 62 aa10.46□□□□□ -0.73
SEMA3B-215ENST00000621029 C10orf95Q9H7T3 257 aa10.44□□□□□ -0.74
SEMA3B-215ENST00000621029 PP632Q6XCG6 107 aa10.43□□□□□ -0.74
SEMA3B-215ENST00000621029 TMEM258P61165 79 aa10.41□□□□□ -0.74
SEMA3B-215ENST00000621029 LINC01558Q9Y6Z2 57 aa10.41□□□□□ -0.74
SEMA3B-215ENST00000621029 LCE3AQ5TA76 89 aa10.38□□□□□ -0.75
SEMA3B-215ENST00000621029 MT1LQ93083 61 aa10.31□□□□□ -0.76
SEMA3B-215ENST00000621029 KRTAP4-9Q9BYQ8 210 aa10.31□□□□□ -0.76
SEMA3B-215ENST00000621029 MT1MQ8N339 61 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms