RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 A8MUU9 505 aa10.57□□□□□ -0.72
LAPTM4B-204ENST00000619747 CRIPTQ9P021 101 aa10.57□□□□□ -0.72
LAPTM4B-204ENST00000619747 TNXBP22105 4242 aa10.53□□□□□ -0.72
LAPTM4B-204ENST00000619747 EPPK1P58107 5090 aaKnown RBP10.53□□□□□ -0.72
LAPTM4B-204ENST00000619747 H0YAA0 97 aa10.48□□□□□ -0.73
LAPTM4B-204ENST00000619747 FAT3Q8TDW7 4589 aa10.45□□□□□ -0.74
LAPTM4B-204ENST00000619747 KRTAP10-8P60410 259 aa10.44□□□□□ -0.74
LAPTM4B-204ENST00000619747 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
LAPTM4B-204ENST00000619747 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
LAPTM4B-204ENST00000619747 A0A1B0GU33 70 aa10.25□□□□□ -0.77
LAPTM4B-204ENST00000619747 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
LAPTM4B-204ENST00000619747 KRTAP4-5Q9BYR2 181 aa10.21□□□□□ -0.78
LAPTM4B-204ENST00000619747 NDUFAF8A1L188 74 aa10.2□□□□□ -0.78
LAPTM4B-204ENST00000619747 KRTAP3-1Q9BYR8 98 aa10.19□□□□□ -0.78
LAPTM4B-204ENST00000619747 XP32Q5T750 250 aa10.15□□□□□ -0.78
LAPTM4B-204ENST00000619747 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.79
LAPTM4B-204ENST00000619747 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
LAPTM4B-204ENST00000619747 LRP2P98164 4655 aa10.1□□□□□ -0.79
LAPTM4B-204ENST00000619747 A0A0A0MQY5 61 aa10.09□□□□□ -0.79
LAPTM4B-204ENST00000619747 K7ERS5 55 aa10.09□□□□□ -0.79
LAPTM4B-204ENST00000619747 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
LAPTM4B-204ENST00000619747 LPAP08519 4548 aa10.09□□□□□ -0.79
LAPTM4B-204ENST00000619747 TPRXLQ17RH7 258 aa10.03□□□□□ -0.8
LAPTM4B-204ENST00000619747 COX6B2Q6YFQ2 88 aa10.02□□□□□ -0.81
LAPTM4B-204ENST00000619747 KRTAP15-1Q3LI76 137 aa9.97□□□□□ -0.81
LAPTM4B-204ENST00000619747 C10orf95Q9H7T3 257 aa9.96□□□□□ -0.81
LAPTM4B-204ENST00000619747 HERC2O95714 4834 aa9.91□□□□□ -0.82
LAPTM4B-204ENST00000619747 BIRC6Q9NR09 4857 aa9.81□□□□□ -0.84
LAPTM4B-204ENST00000619747 J3QL48 77 aa9.8□□□□□ -0.84
LAPTM4B-204ENST00000619747 A0A0D9SG42 100 aa9.8□□□□□ -0.84
LAPTM4B-204ENST00000619747 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
LAPTM4B-204ENST00000619747 S4R3F8 94 aa9.71□□□□□ -0.85
LAPTM4B-204ENST00000619747 KRTAP13-4Q3LI77 160 aa9.69□□□□□ -0.86
LAPTM4B-204ENST00000619747 MUC2Q02817 5179 aa9.59□□□□□ -0.87
LAPTM4B-204ENST00000619747 KRTAP10-6P60371 365 aaPredicted RBP9.58□□□□□ -0.88
LAPTM4B-204ENST00000619747 PCLOQ9Y6V0 5065 aa9.58□□□□□ -0.88
LAPTM4B-204ENST00000619747 HERC1Q15751 4861 aa9.55□□□□□ -0.88
LAPTM4B-204ENST00000619747 LUZP6Q538Z0 58 aa9.55□□□□□ -0.88
LAPTM4B-204ENST00000619747 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
LAPTM4B-204ENST00000619747 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
LAPTM4B-204ENST00000619747 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
LAPTM4B-204ENST00000619747 MUC17Q685J3 4493 aa9.46□□□□□ -0.89
LAPTM4B-204ENST00000619747 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
LAPTM4B-204ENST00000619747 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
LAPTM4B-204ENST00000619747 HMCN2Q8NDA2 5059 aa9.24□□□□□ -0.93
LAPTM4B-204ENST00000619747 KRTAP19-2Q3LHN2 52 aa9.17□□□□□ -0.94
LAPTM4B-204ENST00000619747 PLAC4Q8WY50 150 aa9.14□□□□□ -0.95
LAPTM4B-204ENST00000619747 FAT4Q6V0I7 4981 aa9.12□□□□□ -0.95
LAPTM4B-204ENST00000619747 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
LAPTM4B-204ENST00000619747 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
LAPTM4B-204ENST00000619747 M0QZ58 72 aa9.08□□□□□ -0.96
LAPTM4B-204ENST00000619747 R4GN34 69 aa9.06□□□□□ -0.96
LAPTM4B-204ENST00000619747 UBR4Q5T4S7 5183 aa9.04□□□□□ -0.96
LAPTM4B-204ENST00000619747 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.97
LAPTM4B-204ENST00000619747 LCE2CQ5TA81 110 aa8.81□□□□□ -1
LAPTM4B-204ENST00000619747 M0R2T5 61 aa8.74□□□□□ -1.01
LAPTM4B-204ENST00000619747 MT1HP80294 61 aa8.61□□□□□ -1.03
LAPTM4B-204ENST00000619747 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
LAPTM4B-204ENST00000619747 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
LAPTM4B-204ENST00000619747 KRTAP10-10P60014 251 aa8.43□□□□□ -1.06
LAPTM4B-204ENST00000619747 MT1FP04733 61 aa8.39□□□□□ -1.07
LAPTM4B-204ENST00000619747 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
LAPTM4B-204ENST00000619747 MT2AP02795 61 aa8.38□□□□□ -1.07
LAPTM4B-204ENST00000619747 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
LAPTM4B-204ENST00000619747 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
LAPTM4B-204ENST00000619747 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
LAPTM4B-204ENST00000619747 SPRR5A0A1B0GTR4 108 aa8.24□□□□□ -1.09
LAPTM4B-204ENST00000619747 TNP1P09430 55 aa8.11□□□□□ -1.11
LAPTM4B-204ENST00000619747 MT1BP07438 61 aa8□□□□□ -1.13
LAPTM4B-204ENST00000619747 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
LAPTM4B-204ENST00000619747 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
LAPTM4B-204ENST00000619747 USH2AO75445 5202 aa7.99□□□□□ -1.13
LAPTM4B-204ENST00000619747 INE1O15225 51 aa7.92□□□□□ -1.14
LAPTM4B-204ENST00000619747 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
LAPTM4B-204ENST00000619747 MT1XP80297 61 aa7.86□□□□□ -1.15
LAPTM4B-204ENST00000619747 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
LAPTM4B-204ENST00000619747 KRTAP23-1A1A580 65 aa7.85□□□□□ -1.15
LAPTM4B-204ENST00000619747 LCE2BO14633 110 aa7.81□□□□□ -1.16
LAPTM4B-204ENST00000619747 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
LAPTM4B-204ENST00000619747 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
LAPTM4B-204ENST00000619747 KMT2DO14686 5537 aa7.64□□□□□ -1.19
LAPTM4B-204ENST00000619747 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
LAPTM4B-204ENST00000619747 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
LAPTM4B-204ENST00000619747 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
LAPTM4B-204ENST00000619747 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
LAPTM4B-204ENST00000619747 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
LAPTM4B-204ENST00000619747 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
LAPTM4B-204ENST00000619747 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
LAPTM4B-204ENST00000619747 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
LAPTM4B-204ENST00000619747 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
LAPTM4B-204ENST00000619747 KRTAP19-7Q3SYF9 63 aa7□□□□□ -1.29
LAPTM4B-204ENST00000619747 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
LAPTM4B-204ENST00000619747 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
LAPTM4B-204ENST00000619747 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
LAPTM4B-204ENST00000619747 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
LAPTM4B-204ENST00000619747 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
LAPTM4B-204ENST00000619747 MT1EP04732 61 aa6.81□□□□□ -1.32
LAPTM4B-204ENST00000619747 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
LAPTM4B-204ENST00000619747 MT1LQ93083 61 aa6.75□□□□□ -1.33
LAPTM4B-204ENST00000619747 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms