RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 KRTAP10-4P60372 401 aaPredicted RBP11.96□□□□□ -0.5
PCSK6-218ENST00000619160 KRTAP13-4Q3LI77 160 aa11.95□□□□□ -0.5
PCSK6-218ENST00000619160 KRTAP10-6P60371 365 aaPredicted RBP11.93□□□□□ -0.5
PCSK6-218ENST00000619160 KRTAP3-3Q9BYR6 98 aa11.89□□□□□ -0.51
PCSK6-218ENST00000619160 PKHD1L1Q86WI1 4243 aa11.88□□□□□ -0.51
PCSK6-218ENST00000619160 S4R3F8 94 aa11.83□□□□□ -0.52
PCSK6-218ENST00000619160 APOBP04114 4563 aaKnown RBP11.83□□□□□ -0.52
PCSK6-218ENST00000619160 KRTAP10-8P60410 259 aa11.81□□□□□ -0.52
PCSK6-218ENST00000619160 A0A1B0GVY2 172 aa11.79□□□□□ -0.52
PCSK6-218ENST00000619160 KRTAP3-2Q9BYR7 98 aa11.79□□□□□ -0.52
PCSK6-218ENST00000619160 LRP1Q07954 4544 aaKnown RBP11.74□□□□□ -0.53
PCSK6-218ENST00000619160 KRTAP15-1Q3LI76 137 aa11.73□□□□□ -0.53
PCSK6-218ENST00000619160 MYCBP2O75592 4640 aa11.73□□□□□ -0.53
PCSK6-218ENST00000619160 XP32Q5T750 250 aa11.68□□□□□ -0.54
PCSK6-218ENST00000619160 HSPG2P98160 4391 aa11.67□□□□□ -0.54
PCSK6-218ENST00000619160 FAT3Q8TDW7 4589 aa11.64□□□□□ -0.55
PCSK6-218ENST00000619160 KRTAP12-2P59991 146 aa11.61□□□□□ -0.55
PCSK6-218ENST00000619160 KMT2CQ8NEZ4 4911 aaKnown RBP11.6□□□□□ -0.55
PCSK6-218ENST00000619160 KRTAP21-3Q3LHN1 58 aa11.57□□□□□ -0.56
PCSK6-218ENST00000619160 Q5VSD8 79 aa11.52□□□□□ -0.56
PCSK6-218ENST00000619160 TNXBP22105 4242 aa11.46□□□□□ -0.57
PCSK6-218ENST00000619160 KRTAP12-1P59990 96 aa11.44□□□□□ -0.58
PCSK6-218ENST00000619160 RYR2Q92736 4967 aa11.35□□□□□ -0.59
PCSK6-218ENST00000619160 RYR3Q15413 4870 aa11.3□□□□□ -0.6
PCSK6-218ENST00000619160 LPAP08519 4548 aa11.29□□□□□ -0.6
PCSK6-218ENST00000619160 M0QZ58 72 aa11.25□□□□□ -0.61
PCSK6-218ENST00000619160 A0A0A0MQY5 61 aa11.22□□□□□ -0.61
PCSK6-218ENST00000619160 LRP2P98164 4655 aa11.19□□□□□ -0.62
PCSK6-218ENST00000619160 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
PCSK6-218ENST00000619160 MT1HL1P0DM35 61 aa11.13□□□□□ -0.63
PCSK6-218ENST00000619160 R4GN34 69 aa11.1□□□□□ -0.63
PCSK6-218ENST00000619160 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
PCSK6-218ENST00000619160 RYR1P21817 5038 aa11.03□□□□□ -0.64
PCSK6-218ENST00000619160 LUZP6Q538Z0 58 aa11□□□□□ -0.65
PCSK6-218ENST00000619160 PLAC4Q8WY50 150 aa10.97□□□□□ -0.65
PCSK6-218ENST00000619160 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
PCSK6-218ENST00000619160 LORP23490 312 aaPredicted RBP10.85□□□□□ -0.67
PCSK6-218ENST00000619160 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
PCSK6-218ENST00000619160 SEC61BP60468 96 aaKnown RBP10.65□□□□□ -0.7
PCSK6-218ENST00000619160 CAMK2N1Q7Z7J9 78 aa10.65□□□□□ -0.7
PCSK6-218ENST00000619160 KRTAP4-5Q9BYR2 181 aa10.56□□□□□ -0.72
PCSK6-218ENST00000619160 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
PCSK6-218ENST00000619160 MUC17Q685J3 4493 aa10.42□□□□□ -0.74
PCSK6-218ENST00000619160 PP632Q6XCG6 107 aa10.38□□□□□ -0.75
PCSK6-218ENST00000619160 J3QL48 77 aa10.37□□□□□ -0.75
PCSK6-218ENST00000619160 MUC2Q02817 5179 aa10.28□□□□□ -0.76
PCSK6-218ENST00000619160 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.77
PCSK6-218ENST00000619160 TNP1P09430 55 aa10.16□□□□□ -0.78
PCSK6-218ENST00000619160 HERC2O95714 4834 aa10.13□□□□□ -0.79
PCSK6-218ENST00000619160 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
PCSK6-218ENST00000619160 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
PCSK6-218ENST00000619160 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
PCSK6-218ENST00000619160 HERC1Q15751 4861 aa9.89□□□□□ -0.83
PCSK6-218ENST00000619160 SPRR5A0A1B0GTR4 108 aa9.8□□□□□ -0.84
PCSK6-218ENST00000619160 KRTAP23-1A1A580 65 aa9.77□□□□□ -0.85
PCSK6-218ENST00000619160 FAT4Q6V0I7 4981 aa9.76□□□□□ -0.85
PCSK6-218ENST00000619160 M0R2T5 61 aa9.7□□□□□ -0.86
PCSK6-218ENST00000619160 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
PCSK6-218ENST00000619160 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
PCSK6-218ENST00000619160 SPRR2GQ9BYE4 73 aa9.57□□□□□ -0.88
PCSK6-218ENST00000619160 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
PCSK6-218ENST00000619160 PRO2289Q9P1D8 64 aa9.51□□□□□ -0.89
PCSK6-218ENST00000619160 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
PCSK6-218ENST00000619160 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
PCSK6-218ENST00000619160 RNF213Q63HN8 5207 aa9.38□□□□□ -0.91
PCSK6-218ENST00000619160 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
PCSK6-218ENST00000619160 MT1FP04733 61 aa9.31□□□□□ -0.92
PCSK6-218ENST00000619160 MT1HP80294 61 aa9.3□□□□□ -0.92
PCSK6-218ENST00000619160 MT2AP02795 61 aa9.26□□□□□ -0.93
PCSK6-218ENST00000619160 INE1O15225 51 aa9.18□□□□□ -0.94
PCSK6-218ENST00000619160 KRTAP8-1Q8IUC2 63 aa9.18□□□□□ -0.94
PCSK6-218ENST00000619160 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
PCSK6-218ENST00000619160 KRTAP12-3P60328 96 aa9.09□□□□□ -0.95
PCSK6-218ENST00000619160 KRTAP10-5P60370 271 aa9.07□□□□□ -0.96
PCSK6-218ENST00000619160 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
PCSK6-218ENST00000619160 MT1XP80297 61 aa9.05□□□□□ -0.96
PCSK6-218ENST00000619160 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
PCSK6-218ENST00000619160 MT1BP07438 61 aa9.02□□□□□ -0.97
PCSK6-218ENST00000619160 KRTAP10-7P60409 375 aaPredicted RBP8.93□□□□□ -0.98
PCSK6-218ENST00000619160 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
PCSK6-218ENST00000619160 KRTAP19-5Q3LI72 72 aa8.61□□□□□ -1.03
PCSK6-218ENST00000619160 KMT2DO14686 5537 aa8.55□□□□□ -1.04
PCSK6-218ENST00000619160 USH2AO75445 5202 aa8.52□□□□□ -1.05
PCSK6-218ENST00000619160 LCE3CQ5T5A8 94 aa8.52□□□□□ -1.05
PCSK6-218ENST00000619160 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
PCSK6-218ENST00000619160 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
PCSK6-218ENST00000619160 LCE2BO14633 110 aa8.36□□□□□ -1.07
PCSK6-218ENST00000619160 KRTAP9-6A8MVA2 160 aa8.28□□□□□ -1.08
PCSK6-218ENST00000619160 KRTAP4-7Q9BYR0 210 aa8.21□□□□□ -1.09
PCSK6-218ENST00000619160 KRTAP19-7Q3SYF9 63 aa8.05□□□□□ -1.12
PCSK6-218ENST00000619160 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
PCSK6-218ENST00000619160 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
PCSK6-218ENST00000619160 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
PCSK6-218ENST00000619160 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.13
PCSK6-218ENST00000619160 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
PCSK6-218ENST00000619160 MT1LQ93083 61 aa7.85□□□□□ -1.15
PCSK6-218ENST00000619160 MT1EP04732 61 aa7.79□□□□□ -1.16
PCSK6-218ENST00000619160 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
PCSK6-218ENST00000619160 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
PCSK6-218ENST00000619160 KRTAP4-3Q9BYR4 195 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms