RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CRIPTQ9P021 101 aa2.11□□□□□ -2.07
UBE2D3-233ENST00000618836 DEFB133Q30KQ1 61 aa2.1□□□□□ -2.07
UBE2D3-233ENST00000618836 COX6B2Q6YFQ2 88 aa2.1□□□□□ -2.07
UBE2D3-233ENST00000618836 KRTAP12-2P59991 146 aa2.1□□□□□ -2.07
UBE2D3-233ENST00000618836 WFDC10BQ8IUB3 73 aa2.1□□□□□ -2.07
UBE2D3-233ENST00000618836 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
UBE2D3-233ENST00000618836 MMP24-AS1A0A0U1RRL7 71 aa2.09□□□□□ -2.07
UBE2D3-233ENST00000618836 STATHP02808 62 aa2.09□□□□□ -2.07
UBE2D3-233ENST00000618836 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
UBE2D3-233ENST00000618836 KRTAP13-3Q3SY46 172 aa2.09□□□□□ -2.08
UBE2D3-233ENST00000618836 DEFB134Q4QY38 66 aa2.08□□□□□ -2.08
UBE2D3-233ENST00000618836 DEFB104AQ8WTQ1 72 aa2.08□□□□□ -2.08
UBE2D3-233ENST00000618836 WNK1Q9H4A3 2382 aa2.08□□□□□ -2.08
UBE2D3-233ENST00000618836 KRTAP7-1Q8IUC3 87 aa2.07□□□□□ -2.08
UBE2D3-233ENST00000618836 MRPL34Q9BQ48 92 aaKnown RBP2.07□□□□□ -2.08
UBE2D3-233ENST00000618836 A8MTW9 85 aa2.07□□□□□ -2.08
UBE2D3-233ENST00000618836 KAAG1Q9UBP8 84 aa2.07□□□□□ -2.08
UBE2D3-233ENST00000618836 IGKV2D-30A0A075B6S6 120 aa2.06□□□□□ -2.08
UBE2D3-233ENST00000618836 NOTCH3Q9UM47 2321 aa2.06□□□□□ -2.08
UBE2D3-233ENST00000618836 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.05□□□□□ -2.083e-7■■■□□ 18.2
UBE2D3-233ENST00000618836 DEFB131AP59861 70 aa2.05□□□□□ -2.08
UBE2D3-233ENST00000618836 CNTRLQ7Z7A1 2325 aa2.05□□□□□ -2.08
UBE2D3-233ENST00000618836 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
UBE2D3-233ENST00000618836 CLPSL2Q6UWE3 100 aa2.05□□□□□ -2.08
UBE2D3-233ENST00000618836 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
UBE2D3-233ENST00000618836 ABCA1O95477 2261 aa2.04□□□□□ -2.08
UBE2D3-233ENST00000618836 MAPK1IP1LQ8NDC0 245 aa2.04□□□□□ -2.08
UBE2D3-233ENST00000618836 LYNX1P0DP58 116 aa2.03□□□□□ -2.08
UBE2D3-233ENST00000618836 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
UBE2D3-233ENST00000618836 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
UBE2D3-233ENST00000618836 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
UBE2D3-233ENST00000618836 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 PLCE1Q9P212 2302 aa2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 H0YGG7 62 aa2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 KRTAP10-11P60412 298 aa2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 C10orf95Q9H7T3 257 aa2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 USH2AO75445 5202 aa2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
UBE2D3-233ENST00000618836 RPL37P61927 97 aaKnown RBP2.01□□□□□ -2.09
UBE2D3-233ENST00000618836 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
UBE2D3-233ENST00000618836 LRP2P98164 4655 aa2.01□□□□□ -2.09
UBE2D3-233ENST00000618836 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
UBE2D3-233ENST00000618836 DEFB130BP0DP73 79 aa2□□□□□ -2.09
UBE2D3-233ENST00000618836 DEFB130AP0DP74 79 aa2□□□□□ -2.09
UBE2D3-233ENST00000618836 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
UBE2D3-233ENST00000618836 KNL1Q8NG31 2342 aa1.99□□□□□ -2.09
UBE2D3-233ENST00000618836 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
UBE2D3-233ENST00000618836 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
UBE2D3-233ENST00000618836 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
UBE2D3-233ENST00000618836 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
UBE2D3-233ENST00000618836 USMG5Q96IX5 58 aa1.96□□□□□ -2.1
UBE2D3-233ENST00000618836 SPRR1AP35321 89 aa1.96□□□□□ -2.1
UBE2D3-233ENST00000618836 SPINK13Q1W4C9 94 aa1.96□□□□□ -2.1
UBE2D3-233ENST00000618836 UBE2DNLQ8IWF7 75 aa1.96□□□□□ -2.1
UBE2D3-233ENST00000618836 DEFB110Q30KQ9 67 aa1.95□□□□□ -2.1
UBE2D3-233ENST00000618836 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
UBE2D3-233ENST00000618836 KRTAP2-2Q9BYT5 123 aa1.94□□□□□ -2.1
UBE2D3-233ENST00000618836 UNQ6190/PRO20217Q6UXQ8 127 aa1.94□□□□□ -2.1
UBE2D3-233ENST00000618836 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
UBE2D3-233ENST00000618836 FLGP20930 4061 aaPredicted RBP1.93□□□□□ -2.1
UBE2D3-233ENST00000618836 ROS1P08922 2347 aa1.93□□□□□ -2.1
UBE2D3-233ENST00000618836 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
UBE2D3-233ENST00000618836 APELAP0DMC3 54 aa1.93□□□□□ -2.1
UBE2D3-233ENST00000618836 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
UBE2D3-233ENST00000618836 KRTAP10-4P60372 401 aaPredicted RBP1.92□□□□□ -2.1
UBE2D3-233ENST00000618836 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
UBE2D3-233ENST00000618836 MT1HL1P0DM35 61 aa1.91□□□□□ -2.1
UBE2D3-233ENST00000618836 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
UBE2D3-233ENST00000618836 BRD3OSQ6XYD6 125 aa1.9□□□□□ -2.1
UBE2D3-233ENST00000618836 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.1
UBE2D3-233ENST00000618836 KRTAP5-9P26371 169 aa1.9□□□□□ -2.11
UBE2D3-233ENST00000618836 DEFB105AQ8NG35 78 aa1.9□□□□□ -2.11
UBE2D3-233ENST00000618836 SPRR1BP22528 89 aa1.89□□□□□ -2.11
UBE2D3-233ENST00000618836 Q5VSD8 79 aa1.89□□□□□ -2.11
UBE2D3-233ENST00000618836 DEFB1P60022 68 aa1.88□□□□□ -2.11
UBE2D3-233ENST00000618836 KMT2DO14686 5537 aa1.88□□□□□ -2.11
UBE2D3-233ENST00000618836 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
UBE2D3-233ENST00000618836 H3BUA1 57 aa1.87□□□□□ -2.11
UBE2D3-233ENST00000618836 WNK2Q9Y3S1 2297 aa1.86□□□□□ -2.11
UBE2D3-233ENST00000618836 S4R3F8 94 aa1.85□□□□□ -2.11
UBE2D3-233ENST00000618836 SYNE2Q8WXH0 6885 aaKnown RBP1.84□□□□□ -2.12
UBE2D3-233ENST00000618836 KRTAP13-4Q3LI77 160 aa1.83□□□□□ -2.12
UBE2D3-233ENST00000618836 KRTAP1-5Q9BYS1 174 aa1.83□□□□□ -2.12
UBE2D3-233ENST00000618836 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
UBE2D3-233ENST00000618836 PRLHP81277 87 aa1.82□□□□□ -2.12
UBE2D3-233ENST00000618836 RHPN1-AS1Q9BWJ2 59 aa1.82□□□□□ -2.12
UBE2D3-233ENST00000618836 AKAP6Q13023 2319 aa1.81□□□□□ -2.12
UBE2D3-233ENST00000618836 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
UBE2D3-233ENST00000618836 MT3P25713 68 aa1.81□□□□□ -2.12
UBE2D3-233ENST00000618836 DEFB108BQ8NET1 73 aa1.8□□□□□ -2.12
UBE2D3-233ENST00000618836 APLNQ9ULZ1 77 aa1.79□□□□□ -2.12
UBE2D3-233ENST00000618836 KRTAP10-1P60331 282 aa1.78□□□□□ -2.12
UBE2D3-233ENST00000618836 KRTAP10-6P60371 365 aaPredicted RBP1.78□□□□□ -2.12
UBE2D3-233ENST00000618836 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
UBE2D3-233ENST00000618836 LPAP08519 4548 aa1.78□□□□□ -2.12
UBE2D3-233ENST00000618836 KRTAP12-1P59990 96 aa1.77□□□□□ -2.13
UBE2D3-233ENST00000618836 H3BUX3 64 aa1.76□□□□□ -2.13
UBE2D3-233ENST00000618836 SPINK1P00995 79 aa1.74□□□□□ -2.13
UBE2D3-233ENST00000618836 KRTAP10-12P60413 245 aa1.74□□□□□ -2.13
UBE2D3-233ENST00000618836 PRO0255Q9UI72 69 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms