RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 Q1T7F1 81 aa3.05□□□□□ -1.92
GTDC1-220ENST00000618778 H3BPC8 53 aa3.04□□□□□ -1.92
GTDC1-220ENST00000618778 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
GTDC1-220ENST00000618778 RETNLBQ9BQ08 111 aa3.04□□□□□ -1.92
GTDC1-220ENST00000618778 TP53AIP1Q9HCN2 124 aa3.03□□□□□ -1.92
GTDC1-220ENST00000618778 PRR4Q16378 134 aa3.03□□□□□ -1.92
GTDC1-220ENST00000618778 TYMSOSQ8TAI1 123 aa3.03□□□□□ -1.92
GTDC1-220ENST00000618778 MRPL34Q9BQ48 92 aaKnown RBP3.03□□□□□ -1.92
GTDC1-220ENST00000618778 CYP4F30PQ9H0H9 118 aa3.03□□□□□ -1.92
GTDC1-220ENST00000618778 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
GTDC1-220ENST00000618778 LCA10Q71F78 164 aa3.01□□□□□ -1.93
GTDC1-220ENST00000618778 Q75L30 129 aa3.01□□□□□ -1.93
GTDC1-220ENST00000618778 SPANXA2-OT1Q8N9U9 137 aa3.01□□□□□ -1.93
GTDC1-220ENST00000618778 SEC61BP60468 96 aaKnown RBP3.01□□□□□ -1.93
GTDC1-220ENST00000618778 A6NN06 94 aa2.99□□□□□ -1.93
GTDC1-220ENST00000618778 A8MUN3 132 aa2.99□□□□□ -1.93
GTDC1-220ENST00000618778 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
GTDC1-220ENST00000618778 Q5W150 140 aa2.99□□□□□ -1.93
GTDC1-220ENST00000618778 ATP11AUNQ6ZP68 121 aa2.99□□□□□ -1.93
GTDC1-220ENST00000618778 C7orf65Q6ZTY9 151 aa2.99□□□□□ -1.93
GTDC1-220ENST00000618778 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
GTDC1-220ENST00000618778 IGLV7-46A0A075B6I9 117 aa2.98□□□□□ -1.93
GTDC1-220ENST00000618778 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
GTDC1-220ENST00000618778 LINC00313P59037 77 aa2.97□□□□□ -1.93
GTDC1-220ENST00000618778 A8MU10 97 aa2.96□□□□□ -1.94
GTDC1-220ENST00000618778 Q8N9P0 234 aaPredicted RBP2.96□□□□□ -1.94
GTDC1-220ENST00000618778 LIMD2Q9BT23 127 aa2.96□□□□□ -1.94
GTDC1-220ENST00000618778 KRTAP16-1A8MUX0 517 aa2.96□□□□□ -1.94
GTDC1-220ENST00000618778 PSPHP1O15172 72 aa2.96□□□□□ -1.94
GTDC1-220ENST00000618778 Q5VV11 94 aa2.96□□□□□ -1.94
GTDC1-220ENST00000618778 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
GTDC1-220ENST00000618778 SPINK1P00995 79 aa2.95□□□□□ -1.94
GTDC1-220ENST00000618778 LOC101927531A0A1B0GV80 90 aa2.94□□□□□ -1.94
GTDC1-220ENST00000618778 COA5Q86WW8 74 aa2.93□□□□□ -1.94
GTDC1-220ENST00000618778 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
GTDC1-220ENST00000618778 RPS29P62273 56 aaKnown RBP2.92□□□□□ -1.94
GTDC1-220ENST00000618778 SPTSSBQ8NFR3 76 aa2.92□□□□□ -1.94
GTDC1-220ENST00000618778 HRES1P13985 223 aa2.91□□□□□ -1.94
GTDC1-220ENST00000618778 SPAG11AQ6PDA7 123 aa2.91□□□□□ -1.94
GTDC1-220ENST00000618778 IGKV2-30P06310 120 aa2.91□□□□□ -1.94
GTDC1-220ENST00000618778 TPRXLQ17RH7 258 aa2.91□□□□□ -1.94
GTDC1-220ENST00000618778 CHKB-CPT1BH3BT56 60 aa2.9□□□□□ -1.95
GTDC1-220ENST00000618778 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
GTDC1-220ENST00000618778 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
GTDC1-220ENST00000618778 ACYP2P14621 99 aa2.87□□□□□ -1.95
GTDC1-220ENST00000618778 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
GTDC1-220ENST00000618778 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
GTDC1-220ENST00000618778 C9orf92A6NGG3 77 aa2.87□□□□□ -1.95
GTDC1-220ENST00000618778 PRR15LQ9BU68 103 aa2.86□□□□□ -1.95
GTDC1-220ENST00000618778 LINC01558Q9Y6Z2 57 aa2.86□□□□□ -1.95
GTDC1-220ENST00000618778 A6NED7 52 aa2.86□□□□□ -1.95
GTDC1-220ENST00000618778 A8MUU9 505 aa2.84□□□□□ -1.95
GTDC1-220ENST00000618778 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.95
GTDC1-220ENST00000618778 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
GTDC1-220ENST00000618778 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
GTDC1-220ENST00000618778 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
GTDC1-220ENST00000618778 SPINK7P58062 85 aa2.79□□□□□ -1.96
GTDC1-220ENST00000618778 ADM2Q7Z4H4 148 aa2.79□□□□□ -1.96
GTDC1-220ENST00000618778 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
GTDC1-220ENST00000618778 A0A1B0GU69 56 aa2.76□□□□□ -1.97
GTDC1-220ENST00000618778 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
GTDC1-220ENST00000618778 MT1HP80294 61 aa2.73□□□□□ -1.97
GTDC1-220ENST00000618778 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
GTDC1-220ENST00000618778 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
GTDC1-220ENST00000618778 ROMO1P60602 79 aa2.72□□□□□ -1.97
GTDC1-220ENST00000618778 CSAG1Q6PB30 78 aa2.71□□□□□ -1.98
GTDC1-220ENST00000618778 SPATA8Q6RVD6 105 aa2.71□□□□□ -1.98
GTDC1-220ENST00000618778 UQCR11O14957 56 aa2.7□□□□□ -1.98
GTDC1-220ENST00000618778 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
GTDC1-220ENST00000618778 KRTAP10-6P60371 365 aaPredicted RBP2.67□□□□□ -1.98
GTDC1-220ENST00000618778 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.98
GTDC1-220ENST00000618778 H0YAA0 97 aa2.64□□□□□ -1.99
GTDC1-220ENST00000618778 P0C880 135 aa2.64□□□□□ -1.99
GTDC1-220ENST00000618778 A0A1B0GU33 70 aa2.64□□□□□ -1.99
GTDC1-220ENST00000618778 H1FX-AS1Q4G0G2 97 aa2.64□□□□□ -1.99
GTDC1-220ENST00000618778 M0R2T5 61 aa2.63□□□□□ -1.99
GTDC1-220ENST00000618778 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
GTDC1-220ENST00000618778 S4R3F8 94 aa2.62□□□□□ -1.99
GTDC1-220ENST00000618778 USH2AO75445 5202 aa2.61□□□□□ -1.99
GTDC1-220ENST00000618778 SSPOA2VEC9 5147 aa2.58□□□□□ -2
GTDC1-220ENST00000618778 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
GTDC1-220ENST00000618778 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
GTDC1-220ENST00000618778 MT1FP04733 61 aa2.56□□□□□ -2
GTDC1-220ENST00000618778 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
GTDC1-220ENST00000618778 MT2AP02795 61 aa2.56□□□□□ -2
GTDC1-220ENST00000618778 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
GTDC1-220ENST00000618778 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
GTDC1-220ENST00000618778 NDUFAF8A1L188 74 aa2.53□□□□□ -2
GTDC1-220ENST00000618778 A0A0D9SG42 100 aa2.52□□□□□ -2.01
GTDC1-220ENST00000618778 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
GTDC1-220ENST00000618778 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
GTDC1-220ENST00000618778 K7ERS5 55 aa2.51□□□□□ -2.01
GTDC1-220ENST00000618778 KRTAP10-7P60409 375 aaPredicted RBP2.49□□□□□ -2.01
GTDC1-220ENST00000618778 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
GTDC1-220ENST00000618778 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
GTDC1-220ENST00000618778 M0QZ58 72 aa2.47□□□□□ -2.01
GTDC1-220ENST00000618778 KRTAP12-2P59991 146 aa2.47□□□□□ -2.01
GTDC1-220ENST00000618778 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
GTDC1-220ENST00000618778 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
GTDC1-220ENST00000618778 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms