RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 S4R3F8 94 aa7.72□□□□□ -1.17
SRRT-217ENST00000618411 DMBT1Q9UGM3 2413 aaPredicted RBP7.71□□□□□ -1.18
SRRT-217ENST00000618411 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.18
SRRT-217ENST00000618411 KRTAP12-2P59991 146 aa7.65□□□□□ -1.19
SRRT-217ENST00000618411 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
SRRT-217ENST00000618411 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
SRRT-217ENST00000618411 XP32Q5T750 250 aa7.58□□□□□ -1.2
SRRT-217ENST00000618411 HYDINQ4G0P3 5121 aa7.56□□□□□ -1.2
SRRT-217ENST00000618411 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
SRRT-217ENST00000618411 PKHD1P08F94 4074 aa7.56□□□□□ -1.2
SRRT-217ENST00000618411 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
SRRT-217ENST00000618411 APOBP04114 4563 aaKnown RBP7.5□□□□□ -1.21
SRRT-217ENST00000618411 M0QZ58 72 aa7.46□□□□□ -1.21
SRRT-217ENST00000618411 FAT1Q14517 4588 aa7.42□□□□□ -1.22
SRRT-217ENST00000618411 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
SRRT-217ENST00000618411 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
SRRT-217ENST00000618411 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
SRRT-217ENST00000618411 HSPG2P98160 4391 aa7.33□□□□□ -1.24
SRRT-217ENST00000618411 J3QL48 77 aa7.32□□□□□ -1.24
SRRT-217ENST00000618411 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
SRRT-217ENST00000618411 TNXBP22105 4242 aa7.29□□□□□ -1.24
SRRT-217ENST00000618411 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
SRRT-217ENST00000618411 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
SRRT-217ENST00000618411 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
SRRT-217ENST00000618411 R4GN34 69 aa7.14□□□□□ -1.27
SRRT-217ENST00000618411 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
SRRT-217ENST00000618411 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
SRRT-217ENST00000618411 Q5VSD8 79 aa7.02□□□□□ -1.28
SRRT-217ENST00000618411 LPAP08519 4548 aa6.95□□□□□ -1.3
SRRT-217ENST00000618411 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
SRRT-217ENST00000618411 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
SRRT-217ENST00000618411 LRP2P98164 4655 aa6.89□□□□□ -1.31
SRRT-217ENST00000618411 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
SRRT-217ENST00000618411 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
SRRT-217ENST00000618411 RYR3Q15413 4870 aa6.83□□□□□ -1.32
SRRT-217ENST00000618411 RYR2Q92736 4967 aa6.81□□□□□ -1.32
SRRT-217ENST00000618411 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
SRRT-217ENST00000618411 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
SRRT-217ENST00000618411 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
SRRT-217ENST00000618411 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
SRRT-217ENST00000618411 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
SRRT-217ENST00000618411 RYR1P21817 5038 aa6.68□□□□□ -1.34
SRRT-217ENST00000618411 TNP1P09430 55 aa6.66□□□□□ -1.34
SRRT-217ENST00000618411 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
SRRT-217ENST00000618411 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
SRRT-217ENST00000618411 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
SRRT-217ENST00000618411 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
SRRT-217ENST00000618411 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
SRRT-217ENST00000618411 HERC2O95714 4834 aa6.43□□□□□ -1.38
SRRT-217ENST00000618411 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
SRRT-217ENST00000618411 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
SRRT-217ENST00000618411 INE1O15225 51 aa6.3□□□□□ -1.4
SRRT-217ENST00000618411 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
SRRT-217ENST00000618411 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
SRRT-217ENST00000618411 HERC1Q15751 4861 aa6.24□□□□□ -1.41
SRRT-217ENST00000618411 LCE3AQ5TA76 89 aa6.21□□□□□ -1.41
SRRT-217ENST00000618411 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
SRRT-217ENST00000618411 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
SRRT-217ENST00000618411 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
SRRT-217ENST00000618411 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
SRRT-217ENST00000618411 MUC2Q02817 5179 aa6.04□□□□□ -1.44
SRRT-217ENST00000618411 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
SRRT-217ENST00000618411 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
SRRT-217ENST00000618411 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
SRRT-217ENST00000618411 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
SRRT-217ENST00000618411 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
SRRT-217ENST00000618411 M0R2T5 61 aa5.83□□□□□ -1.48
SRRT-217ENST00000618411 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
SRRT-217ENST00000618411 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
SRRT-217ENST00000618411 MT1FP04733 61 aa5.8□□□□□ -1.48
SRRT-217ENST00000618411 MT1XP80297 61 aa5.79□□□□□ -1.48
SRRT-217ENST00000618411 MT2AP02795 61 aa5.79□□□□□ -1.48
SRRT-217ENST00000618411 MT1HP80294 61 aa5.74□□□□□ -1.49
SRRT-217ENST00000618411 MT1BP07438 61 aa5.73□□□□□ -1.49
SRRT-217ENST00000618411 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
SRRT-217ENST00000618411 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
SRRT-217ENST00000618411 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
SRRT-217ENST00000618411 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
SRRT-217ENST00000618411 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
SRRT-217ENST00000618411 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
SRRT-217ENST00000618411 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
SRRT-217ENST00000618411 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
SRRT-217ENST00000618411 LCE2BO14633 110 aa5.44□□□□□ -1.54
SRRT-217ENST00000618411 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
SRRT-217ENST00000618411 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
SRRT-217ENST00000618411 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
SRRT-217ENST00000618411 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
SRRT-217ENST00000618411 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
SRRT-217ENST00000618411 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
SRRT-217ENST00000618411 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
SRRT-217ENST00000618411 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
SRRT-217ENST00000618411 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
SRRT-217ENST00000618411 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
SRRT-217ENST00000618411 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
SRRT-217ENST00000618411 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
SRRT-217ENST00000618411 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
SRRT-217ENST00000618411 KMT2DO14686 5537 aa5.09□□□□□ -1.59
SRRT-217ENST00000618411 MT1LQ93083 61 aa5.05□□□□□ -1.6
SRRT-217ENST00000618411 MT1EP04732 61 aa4.98□□□□□ -1.61
SRRT-217ENST00000618411 USH2AO75445 5202 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms