RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ACYP1P07311 99 aa9.69□□□□□ -0.86
NEDD4L-237ENST00000617539 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
NEDD4L-237ENST00000617539 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
NEDD4L-237ENST00000617539 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
NEDD4L-237ENST00000617539 H0Y9P7 68 aa9.65□□□□□ -0.86
NEDD4L-237ENST00000617539 UQCRQO14949 82 aa9.65□□□□□ -0.86
NEDD4L-237ENST00000617539 HIST1H4AP62805 103 aaKnown RBP9.65□□□□□ -0.86
NEDD4L-237ENST00000617539 IMUPQ9GZP8 106 aa9.63□□□□□ -0.87
NEDD4L-237ENST00000617539 H0YAA0 97 aa9.6□□□□□ -0.87
NEDD4L-237ENST00000617539 ATOX1O00244 68 aa9.6□□□□□ -0.87
NEDD4L-237ENST00000617539 NDUFC1O43677 76 aa9.59□□□□□ -0.87
NEDD4L-237ENST00000617539 KRTAP5-9P26371 169 aa9.58□□□□□ -0.88
NEDD4L-237ENST00000617539 KMT2DO14686 5537 aa9.54□□□□□ -0.88
NEDD4L-237ENST00000617539 MDN1Q9NU22 5596 aa9.5□□□□□ -0.89
NEDD4L-237ENST00000617539 A8MUN3 132 aa9.5□□□□□ -0.89
NEDD4L-237ENST00000617539 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
NEDD4L-237ENST00000617539 LINC00643Q86TS7 51 aa9.47□□□□□ -0.89
NEDD4L-237ENST00000617539 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
NEDD4L-237ENST00000617539 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
NEDD4L-237ENST00000617539 KRTAP20-1Q3LI63 56 aa9.4□□□□□ -0.9
NEDD4L-237ENST00000617539 MT1XP80297 61 aa9.38□□□□□ -0.91
NEDD4L-237ENST00000617539 MP68P56378 58 aa9.34□□□□□ -0.91
NEDD4L-237ENST00000617539 P0C880 135 aa9.3□□□□□ -0.92
NEDD4L-237ENST00000617539 PRO2289Q9P1D8 64 aa9.29□□□□□ -0.92
NEDD4L-237ENST00000617539 A0A1B0GV90 55 aa9.24□□□□□ -0.93
NEDD4L-237ENST00000617539 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
NEDD4L-237ENST00000617539 R4GN34 69 aa9.23□□□□□ -0.93
NEDD4L-237ENST00000617539 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
NEDD4L-237ENST00000617539 SPRR2FQ96RM1 72 aa9.22□□□□□ -0.93
NEDD4L-237ENST00000617539 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
NEDD4L-237ENST00000617539 H3BPC8 53 aa9.2□□□□□ -0.94
NEDD4L-237ENST00000617539 M0QZ58 72 aa9.17□□□□□ -0.94
NEDD4L-237ENST00000617539 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
NEDD4L-237ENST00000617539 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
NEDD4L-237ENST00000617539 SPRR2EP22531 72 aa9.13□□□□□ -0.95
NEDD4L-237ENST00000617539 SPRR2BP35325 72 aa9.13□□□□□ -0.95
NEDD4L-237ENST00000617539 SPRR2AP35326 72 aa9.13□□□□□ -0.95
NEDD4L-237ENST00000617539 KRTAP8-1Q8IUC2 63 aa9.12□□□□□ -0.95
NEDD4L-237ENST00000617539 KRTAP2-3P0C7H8 128 aa9.1□□□□□ -0.95
NEDD4L-237ENST00000617539 KRTAP2-4Q9BYR9 128 aa9.1□□□□□ -0.95
NEDD4L-237ENST00000617539 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
NEDD4L-237ENST00000617539 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
NEDD4L-237ENST00000617539 KRTAP4-8A0A0G2JLE6 195 aa9.03□□□□□ -0.96
NEDD4L-237ENST00000617539 J3QR89 54 aa9.03□□□□□ -0.96
NEDD4L-237ENST00000617539 KRTAP4-8Q9BYQ9 185 aa9.03□□□□□ -0.96
NEDD4L-237ENST00000617539 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
NEDD4L-237ENST00000617539 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
NEDD4L-237ENST00000617539 KRTAP10-7P60409 375 aaPredicted RBP8.94□□□□□ -0.98
NEDD4L-237ENST00000617539 ACYP2P14621 99 aa8.9□□□□□ -0.98
NEDD4L-237ENST00000617539 KRTAP10-12P60413 245 aa8.88□□□□□ -0.99
NEDD4L-237ENST00000617539 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
NEDD4L-237ENST00000617539 SPRR2DP22532 72 aa8.82□□□□□ -1
NEDD4L-237ENST00000617539 KRTAP2-2Q9BYT5 123 aa8.8□□□□□ -1
NEDD4L-237ENST00000617539 KRTAP2-1Q9BYU5 128 aa8.8□□□□□ -1
NEDD4L-237ENST00000617539 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
NEDD4L-237ENST00000617539 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
NEDD4L-237ENST00000617539 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
NEDD4L-237ENST00000617539 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
NEDD4L-237ENST00000617539 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
NEDD4L-237ENST00000617539 K7ERU9 68 aa8.62□□□□□ -1.03
NEDD4L-237ENST00000617539 LCE3BQ5TA77 95 aa8.6□□□□□ -1.03
NEDD4L-237ENST00000617539 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
NEDD4L-237ENST00000617539 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
NEDD4L-237ENST00000617539 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
NEDD4L-237ENST00000617539 KRTAP19-7Q3SYF9 63 aa8.39□□□□□ -1.07
NEDD4L-237ENST00000617539 COA5Q86WW8 74 aa8.37□□□□□ -1.07
NEDD4L-237ENST00000617539 LCE5AQ5TCM9 118 aa8.32□□□□□ -1.08
NEDD4L-237ENST00000617539 MT1EP04732 61 aa8.31□□□□□ -1.08
NEDD4L-237ENST00000617539 A0A0D9SG42 100 aa8.28□□□□□ -1.08
NEDD4L-237ENST00000617539 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
NEDD4L-237ENST00000617539 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
NEDD4L-237ENST00000617539 KRTAP19-3Q7Z4W3 81 aa8.25□□□□□ -1.09
NEDD4L-237ENST00000617539 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.1
NEDD4L-237ENST00000617539 SEC61GP60059 68 aa8.2□□□□□ -1.1
NEDD4L-237ENST00000617539 A0A1B0GU33 70 aa8.16□□□□□ -1.1
NEDD4L-237ENST00000617539 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
NEDD4L-237ENST00000617539 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
NEDD4L-237ENST00000617539 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
NEDD4L-237ENST00000617539 COX7CP15954 63 aa8.13□□□□□ -1.11
NEDD4L-237ENST00000617539 KRTAP19-5Q3LI72 72 aa8.11□□□□□ -1.11
NEDD4L-237ENST00000617539 H7BZZ5 65 aa8.1□□□□□ -1.11
NEDD4L-237ENST00000617539 KRTAP4-9Q9BYQ8 210 aa8.07□□□□□ -1.12
NEDD4L-237ENST00000617539 MT1GP13640 62 aa8.01□□□□□ -1.13
NEDD4L-237ENST00000617539 GPR98Q8WXG9 6306 aa7.99□□□□□ -1.13
NEDD4L-237ENST00000617539 A8MU10 97 aa7.93□□□□□ -1.14
NEDD4L-237ENST00000617539 MT1MQ8N339 61 aa7.92□□□□□ -1.14
NEDD4L-237ENST00000617539 A0A1B0GU69 56 aa7.91□□□□□ -1.14
NEDD4L-237ENST00000617539 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
NEDD4L-237ENST00000617539 MT1LQ93083 61 aa7.91□□□□□ -1.14
NEDD4L-237ENST00000617539 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
NEDD4L-237ENST00000617539 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
NEDD4L-237ENST00000617539 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
NEDD4L-237ENST00000617539 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
NEDD4L-237ENST00000617539 HMCN1Q96RW7 5635 aa7.8□□□□□ -1.16
NEDD4L-237ENST00000617539 KRTAP4-3Q9BYR4 195 aa7.78□□□□□ -1.16
NEDD4L-237ENST00000617539 LCE4AQ5TA78 99 aa7.77□□□□□ -1.17
NEDD4L-237ENST00000617539 TNP1P09430 55 aa7.74□□□□□ -1.17
NEDD4L-237ENST00000617539 MT4P47944 62 aa7.74□□□□□ -1.17
NEDD4L-237ENST00000617539 ANAPC13Q9BS18 74 aa7.71□□□□□ -1.18
NEDD4L-237ENST00000617539 KRTAP5-4Q6L8H1 288 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms